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Add new module sentieoncli/dnascopelongread#10292

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alkc wants to merge 1 commit intonf-core:masterfrom
alkc:alkc/add-sentieon-dnascope-longread
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Add new module sentieoncli/dnascopelongread#10292
alkc wants to merge 1 commit intonf-core:masterfrom
alkc:alkc/add-sentieon-dnascope-longread

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@alkc
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@alkc alkc commented Mar 2, 2026

A module encapsulating the sentieon-cli dnascope-longread pipeline.

TODO

PR checklist

Closes #9887

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@SPPearce
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SPPearce commented Mar 3, 2026

Just an FYI, you'll need to make this PR from a branch within the nf-core organisation for the tests to be able to find the license server and run.

@alkc
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alkc commented Mar 3, 2026

Just an FYI, you'll need to make this PR from a branch within the nf-core organisation for the tests to be able to find the license server and run.

Thank you for the info, I'll try to do that instead.

@alkc alkc closed this Mar 3, 2026
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new module: sentieon-cli/dnascope-longread

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