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Update README.md
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Fixed URL link in manuscript citation. 
Added links to NER experiment scripts in manuscript branch
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jason-fries authored Aug 7, 2021
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Expand Up @@ -30,6 +30,10 @@ Requirements: Python 3.6 or later. We recomend using `pip` to install

`pip install -r requirements.txt`

## Experiments

NER experiments from the manuscript are found [here](https://github.com/som-shahlab/trove/tree/manuscript/scripts). We are in the process of refactoring these for easier usage.

## Contributions
We welcome all contributions to the code base! Please submit a pull request and/or start a discussion on GitHub Issues.

Expand All @@ -42,7 +46,7 @@ we would love to start a conversation around how to support sharing labelers in
## Citation
If use Trove in your research, please cite us!

Fries, J.A., Steinberg, E., Khattar, S. et al. Ontology-driven weak supervision for clinical entity classification in electronic health records. Nat Commun 12, 2017 (2021). https://doi-org.stanford.idm.oclc.org/10.1038/s41467-021-22328-4
Fries, J.A., Steinberg, E., Khattar, S. et al. [Ontology-driven weak supervision for clinical entity classification in electronic health records](https://www.nature.com/articles/s41467-021-22328-4). Nat Commun 12, 2017 (2021). https://doi.org/10.1038/s41467-021-22328-4

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@article{fries2021trove,
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