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Adding TArrow for testing#220

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edyoshikun wants to merge 13 commits intomsd_updatemehta-lab/VisCy:msd_updatefrom tarrowmehta-lab/VisCy:tarrowCopy head branch name to clipboard

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Commits on Jan 23, 2025

• gmm clustering and silhoutte score

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• fix the issue with distance.py for plotting the pairwise matrix

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Commits on Jan 29, 2025

• prototype wrapping the timearrow model and dataloader that takes ome-zarr to spit to tarrowdataset

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• fixing tensorboard logging for metrics and losses. Adding some coments to clarify metrics.

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Commits on Jan 30, 2025

• adding tarrow's visualization for tensorboard

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• ruff

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• remove unwanted files from pr

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• revert unwatned changes to files

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• modify the shuffling of indices and adding concatdatasets instead of randomsampler

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• adding gradcam prototype

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Commits on Jan 31, 2025

• adding custom gradcam to tarrow

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• modifying gradcam so it's compatible with the config file

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• swapping to use callables so we can configure the augmentations

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