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Annotation Upgrade

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@migbro migbro released this 28 Sep 13:45
· 78 commits to master since this release
2b6822c

In an effort to standardize annotation for both DNA and RNA, this adds a new annotation workflow.

  • Added standalone wf with ability to strip old annotations to avoid conflicts and re-use old calls
  • Upgraded from VEP 93 to VEP 105
  • Incorporated workflow into single sample calling
  • Added updated gnomad, clinvar, and dbsnsfp and intervar references to enhance "off-the-shelf" usability for downstream germline users

What's Changed

  • 🚀 Add germline SNV Workflow by @migbro in #23
  • 💪 Add annotation workflow and upgrade by @migbro in #24

Full Changelog: v0.3.0...v0.4.0