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add http://varnomen.hgvs.org to ignore error list #106

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Merged
ryma2fhir merged 1 commit into from
Jan 23, 2025
Merged

add http://varnomen.hgvs.org to ignore error list #106

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5 changes: 3 additions & 2 deletions src/common.js.ts
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Original file line number Diff line number Diff line change
Expand Up @@ -280,8 +280,6 @@
//Fragment codesystems can't be checked
if (issue.diagnostics.includes('Unknown code in fragment CodeSystem')) return false;

//Hide errors relating to finding codes from system:http://human-phenotype-ontology.org as these are not within the Terminology server
if (issue.diagnostics.includes('Validation failed for \'http://human-phenotype-ontology.org')) return false;
}

// if error not handled above, return error if FailOnWarning is true
Expand Down Expand Up @@ -312,6 +310,9 @@

//Hide errors relating to finding codes from system:http://human-phenotype-ontology.org as these are not within the Terminology server
if (issue.diagnostics.includes('Validation failed for \'http://human-phenotype-ontology.org')) return false;

// Issue with GitHub validator requiring code to be in CodeSystem asset when there is none. No issues with the validator itself. The ValueSet in question is https://terminology.hl7.org/5.5.0/CodeSystem-v3-hgvs.html
if (issue.diagnostics.includes('http://varnomen.hgvs.org')) return false;
}
if (issue.location !== undefined && issue.location.length>0) {
if (issue.location[0].includes('StructureMap.group')) return false;
Expand Down
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