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🐛 fix pingouin links
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enryH committed Feb 21, 2025
1 parent 8e744df commit 515a4f1
Showing 1 changed file with 5 additions and 3 deletions.
8 changes: 5 additions & 3 deletions src/acore/differential_regulation/tests.py
Original file line number Diff line number Diff line change
Expand Up @@ -72,7 +72,9 @@ def calculate_ttest(
):
"""
Calculates the t-test for the means of independent samples belonging to two different
groups. For more information visit
groups using scipy.stats.ttest_ind_.
.. _scipy.stats.ttest_ind: \
https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.ttest_ind.html.
:param df: pandas dataframe with groups and subjects as rows and protein identifier
Expand Down Expand Up @@ -132,7 +134,7 @@ def calculate_thsd(df, column, group="group", alpha=0.05, is_logged=True):
Pairwise Tukey-HSD posthoc test using pingouin.pairwise_tukey_.
.. _pingouin.pairwise_tukey: \
https://pingouin-stats.org/generated/pingouin.pairwise_tukey.html
https://pingouin-stats.org/build/html/generated/pingouin.pairwise_tukey.html
:param df: pandas dataframe with group and protein identifier as columns
:param str column: column containing the protein identifier
Expand Down Expand Up @@ -171,7 +173,7 @@ def calculate_pairwise_ttest(
and calculates fold-changes using pingouin.pairwise_ttests_.
.. _pingouin.pairwise_ttests: \
https://pingouin-stats.org/generated/pingouin.pairwise_ttests.html.
https://pingouin-stats.org/build/html/generated/pingouin.pairwise_ttests.html.
:param df: pandas dataframe with subject and group as rows and protein identifier as column.
:param str column: column label containing the dependant variable
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