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xulab-nwafu · Nov 23, 2016 · c11a8de · c11a8de
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diff --git a/README.md b/README.md
@@ -7,14 +7,14 @@ N.B.: the scripts `dnaseq` and `rnaseq` are work with the hardware and software
 HIgh-Throughput Sequencing (hits) pipeline
 ------------------------------------------
 ```
-hits 0.2.1
+hits 0.2.2
 
 Usage:
 
     hits <option>
 
     -p  pipeline for DNAseq [D] or RNAseq [R] analysis
-    -d  directory that containing FASTQ file(s), .fq/.fastq
+    -d  directory that containing FASTQ file(s), .fq/.fastq(.gz)
     -g  reference genome
     -a  annotation file in GTF format [work with -p R]
     -o  output directory

diff --git a/hits b/hits
@@ -314,7 +314,7 @@ Usage:
     $appname <option>
 
     -p  pipeline for DNAseq [D] or RNAseq [R] analysis
-    -d  directory that containing FASTQ file(s), .fq/.fastq
+    -d  directory that containing FASTQ file(s), .fq/.fastq(.gz)
     -g  reference genome
     -a  annotation file in GTF format [work with -p R]
     -o  output directory