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LD matrix for the EAS and AFR populations #11

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1667857557 opened this issue May 13, 2024 · 2 comments
Open

LD matrix for the EAS and AFR populations #11

1667857557 opened this issue May 13, 2024 · 2 comments

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@1667857557
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Hi Dr.Luo

Our work requires the LD matrix for the EAS and AFR populations. Do you have plans to provide the LD matrix for other populations, or should we calculate the LD matrix ourselves? If so, would you be willing to provide the workflow for creating the LD matrix file using the bed, bim, and fam files?

Best,
Huang

@kevinlkx
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Thanks for your suggestions. Yes, we could provide those LD matrices of EAS and AFR from 1000 Genomes, and will provide a function for you to create LD matrices using your own PLINK files.

@1667857557
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We appreciate your excellent work

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