pdb-compare

0. Getting started

1. Create a conda environment with Python 3.7 and activate it

conda create --name pdbcompare python=3.7

conda activate pdbcompare

2. Install poetry (python package manager)

conda install poetry 

3. Install pymol

conda install -c schrodinger -c conda-forge pymol-bundle

4. Install the benchmark

git clone https://github.com/wells-wood-research/sequence-recovery-benchmark.git

cd sequence-recovery-benchmark

git checkout command-line-tools

poetry run pip install -r requirements.txt

poetry run pip install .