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update jupyter in the OOD demo #205

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Mar 13, 2025
Merged

update jupyter in the OOD demo #205

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6 changes: 3 additions & 3 deletions ondemand/README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -631,7 +631,7 @@ why it's not directly in the shell scripts `PATH`.
We need to add this line to our job's shell script to enable it.

```shell
source /usr/local/jupyter/2.1.4/bin/activate
source /usr/local/jupyter/4.3.5/bin/activate
```

So let's [open the template/script.sh.erb in the file editor](https://localhost:3443/pun/sys/file-editor/edit/home/hpcadmin/ondemand/dev/jupyter/template/script.sh.erb)
Expand All @@ -643,7 +643,7 @@ Lines 24 - 31 of `template/script.sh.erb` should now look like this.
# Benchmark info
echo "TIMING - Starting jupyter at: $(date)"

source /usr/local/jupyter/2.1.4/bin/activate
source /usr/local/jupyter/4.3.5/bin/activate

# Launch the Jupyter Notebook Server
set -x
Expand Down Expand Up @@ -1109,7 +1109,7 @@ cd "${HOME}"
# Benchmark info
echo "TIMING - Starting jupyter at: $(date)"

source /usr/local/jupyter/2.1.4/bin/activate
source /usr/local/jupyter/4.3.5/bin/activate

# Launch the Jupyter Notebook Server
set -x
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4 changes: 2 additions & 2 deletions ondemand/jupyter/template/script.sh.erb
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Expand Up @@ -10,11 +10,11 @@ cd "${HOME}"
# Start Jupyter Notebook Server
#

source /usr/local/jupyter/2.1.4/bin/activate
source /usr/local/jupyter/4.3.5/bin/activate

# Benchmark info
echo "TIMING - Starting jupyter at: $(date)"

# Launch the Jupyter Notebook Server
set -x
jupyter notebook --config="${CONFIG_FILE}" <%= context.extra_jupyter_args %>
jupyter lab --config="${CONFIG_FILE}" <%= context.extra_jupyter_args %>
8 changes: 5 additions & 3 deletions slurm/install.sh
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Expand Up @@ -109,10 +109,12 @@ echo -e "# Disable Avahi (since it does not run inside the containers)\n-A" >> /
log_info "Configuring PCP logger with suitable container defaults.."
sed -i 's#^LOCALHOSTNAME.*$#LOCALHOSTNAME y n "/home/pcp/$(date +%Y)/$(date +%m)/LOCALHOSTNAME/$(date +%Y)-$(date +%m)-$(date +%d)" -r -c /etc/pcp/pmlogger/pmlogger-supremm.config#' /etc/pcp/pmlogger/control.d/local

export JUPYTER_VERSION=4.3.5

log_info "Installing Jupyter.."
python3 -m venv /usr/local/jupyter/2.1.4 --prompt jupyter/2.1.4
source /usr/local/jupyter/2.1.4/bin/activate
pip install jupyterlab==2.1.4 jupyter-console qtconsole ipywidgets plotly==4.8.2 pandas scikit-learn numpy
python3 -m venv /usr/local/jupyter/$JUPYTER_VERSION --prompt jupyter/$JUPYTER_VERSION
source /usr/local/jupyter/$JUPYTER_VERSION/bin/activate
pip install jupyterlab==$JUPYTER_VERSION jupyter-console qtconsole ipywidgets plotly pandas scikit-learn numpy
deactivate

dnf clean all
Expand Down