fix parameter min_size

tjiangHIT · May 12, 2023 · 5e4f828 · 5e4f828
1 parent a507674
commit 5e4f828
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Showing 4 changed files with 8 additions and 8 deletions.
diff --git a/setup.py b/setup.py
@@ -7,7 +7,7 @@
 
 setup(
     name = "cuteSV",
-    version = "2.0.2",
+    version = "2.0.3",
     description = "Long-read-based human genomic structural variation detection with cuteSV",
     author = "Jiang Tao",
     author_email = "[email protected]",

diff --git a/src/cuteSV/cuteSV b/src/cuteSV/cuteSV
@@ -4,8 +4,8 @@
  * All rights Reserved, Designed By HIT-Bioinformatics   
  * @Title: cuteSV 
  * @author: tjiang & sqcao
- * @date: Nov 3rd 2022
- * @version V2.0.2
+ * @date: May 12th 2023
+ * @version V2.0.3
 '''
 
 import pysam

diff --git a/src/cuteSV/cuteSV_Description.py b/src/cuteSV/cuteSV_Description.py
@@ -2,12 +2,12 @@
  * All rights Reserved, Designed By HIT-Bioinformatics   
  * @Title:  cuteSV_Description.py
  * @author: tjiang & sqcao
- * @date: Nov 3rd 2022
- * @version V2.0.2
+ * @date: May 12th 2023
+ * @version V2.0.3
 '''
 import argparse
 
-VERSION = '2.0.2'
+VERSION = '2.0.3'
 
 class cuteSVdp(object):
 	'''

diff --git a/src/cuteSV/cuteSV_genotype.py b/src/cuteSV/cuteSV_genotype.py
@@ -378,8 +378,8 @@ def generate_pvcf(args, result, contigINFO, argv, ref_g):
     for i in result:
         if i == []:
             continue
-        if i[7][5] == '.,.':
-            print(i)
+        # if i[7][5] == '.,.':
+        #     print(i)
         if i[7][5] == "." or i[7][5] == None:
             filter_lable = "PASS"
         else: