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vembrane/vembrane
vembrane/vembrane Publicvembrane filters VCF records using python expressions
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snakemake-workflows/cyrcular-calling
snakemake-workflows/cyrcular-calling PublicA Snakemake workflow for ecDNA detection in Nanopore or Illumina sequencing reads derived from DNA samples enriched for circular DNA.
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varfish-org/mehari
varfish-org/mehari PublicVEP-like tool for sequence ontology and HGVS annotation of VCF files
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snakemake/snakemake
snakemake/snakemake PublicThis is the development home of the workflow management system Snakemake. For general information, see
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rust-bio/rust-bio
rust-bio/rust-bio PublicThis library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
1,476 contributions in the last year
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Contribution activity
November 2025
Created 4 commits in 3 repositories
Created a pull request in varfish-org/mehari that received 2 comments
feat: add support for clinvar counts in db check
Summary by CodeRabbit New Features Clinvar integration: Added support for HGNC and transcript accession count data sources for comprehensive val…
Opened 3 other pull requests in 3 repositories
bihealth/altamisa
1
merged
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chore: release 0.3.1
This contribution was made on Nov 10
bihealth/svirlpool
1
open
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refactor: Reinstate linting and type checking
This contribution was made on Nov 6
BfArM-MVH/grz-tools
1
open
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fix(grz-common,grz-cli): Do not resolve grz-check paths
This contribution was made on Nov 3
Reviewed 2 pull requests in 2 repositories
bihealth/altamisa
1 pull request
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chore: update tested Python versions
This contribution was made on Nov 10
BfArM-MVH/grz-tools
1 pull request
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chore(grz-common,grz-cli,grzctl,grz-db,grz-pydantic-models): Upgrade pydantic to 2.12
This contribution was made on Nov 5
Opened 1 issue in 1 repository
BfArM-MVH/grz-tools
1
open
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When validating, add heuristic for checking
*.gzfiles for existence of gzip header / magic bytesThis contribution was made on Nov 3





