Implemented a Base image dataset class #624
Open
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Hi,
I was working on the VAE bounty. That bounty is based on the COVID-19 dataset.
While looking at it, I wondered how users could customize the dataset, to use other images than this specific dataset.
So, I took the liberty of creating a BaseImageDataset class, and use that as based for the COVID19 dataset class.
I've also converted
examples/covid19cxr_conformal.pyinto a notebook, as I thought that would be easier to read and fit better in an examples/ folder.There are also a couple of test files for the new dataset class.
I've also improved the error message when the data is not found, suggesting users where they can download it.
I've added openpyxl as dependency because it is needed to read the metadata files.