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misc update ROSE_main.py
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Adetunji committed Apr 18, 2021
1 parent 282040a commit 0722a77
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion bin/ROSE_main.py
Original file line number Diff line number Diff line change
Expand Up @@ -478,7 +478,7 @@ def main():
allTableFile = "%s/%s_AllStitched.table.txt" % (outFolder,inputName)

if options.custom_genome:
cmd1 = "ROSE_geneMapper.py --custom %s -i %s -r TRUE" % (options.custom_genome,superTableFile)
cmd1 = "ROSE_geneMapper.py --custom %s -i %s -r TRUE" % (options.custom_genome,superTableFile)
cmd2 = "ROSE_geneMapper.py --custom %s -i %s -r TRUE" % (options.custom_genome,allTableFile)
else:
cmd1 = "ROSE_geneMapper.py -g %s -i %s -r TRUE" % (genome,superTableFile)
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