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refactor: remove finch conversion, support zstd and lzma in wasm (#3521)
Address sourmash-bio/branchwater#41 Allow zstd and lzma in wasm. Removed finch conversion because it has conflicts with lzma version, but also... I don't think it was ever used? People can stick to `0.18.0` and we can bring it back if needed.
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Original file line number | Diff line number | Diff line change |
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@@ -1,6 +1,6 @@ | ||
[package] | ||
name = "sourmash" | ||
version = "0.18.0" | ||
version = "0.19.0" | ||
authors = ["Luiz Irber <[email protected]>", "N. Tessa Pierce-Ward <[email protected]>", "C. Titus Brown <[email protected]>"] | ||
description = "tools for comparing biological sequences with k-mer sketches" | ||
repository = "https://github.com/sourmash-bio/sourmash" | ||
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@@ -19,7 +19,6 @@ crate-type = ["lib", "staticlib", "cdylib"] | |
bench = false | ||
|
||
[features] | ||
from-finch = ["dep:finch"] | ||
parallel = ["dep:rayon"] | ||
maturin = [] | ||
branchwater = ["dep:rocksdb", "parallel"] | ||
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@@ -34,7 +33,6 @@ cfg-if = "1.0" | |
counter = "0.6.0" | ||
csv = "1.3.1" | ||
enum_dispatch = "0.3.13" | ||
finch = { version = "0.6.0", optional = true } | ||
fixedbitset = "0.4.0" | ||
getset = "0.1.4" | ||
histogram = "0.11.2" | ||
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@@ -44,7 +42,9 @@ md5 = "0.7.0" | |
memmap2 = "0.9.5" | ||
murmurhash3 = "0.0.5" | ||
needletail = { version = "0.6.1", default-features = false } | ||
niffler = { version = "2.4.0", default-features = false, features = [ "gz" ] } | ||
niffler = { version = "2.6.0", default-features = false, features = [ "gz", "zstd", "lzma" ] } | ||
# declare liblzma here to allow static compilation and fix macos linking issues in Python wheel | ||
liblzma = { version = "0.3.0", features = ["static"] } | ||
nohash-hasher = "0.2.0" | ||
num-iter = "0.1.45" | ||
once_cell = "1.18.0" | ||
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