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1. NeST NeST Public

   Jupyter Notebook 1 12

2. LymphoSeq2 LymphoSeq2 Public

   R package analyzes high-throughput sequencing of T and B cell receptor complementarity determining region 3 (CDR3) sequences generated by major Immuno sequencing platforms

   R 3 3

3. airr_seq_pipelines airr_seq_pipelines Public

   AIRR-Seq analysis workflows

   R 1

4. scrna_seq_pipelines scrna_seq_pipelines Public

   Nextflow pipelines for scRNA-Seq GEX and VDJ analysis in R

   R

5. quest quest Public

   Quantitative Understanding of Epitope Specificity in T-cells

   Python

6. viral_genomics viral_genomics Public

   Forked from WarrenLabFH/viral_genomics

   Workflows from the EBV ENKTL project

   Nextflow