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Add Four new Covid-19 Vaccine Codes #388

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merged 2 commits into from
Sep 5, 2024
Merged

Add Four new Covid-19 Vaccine Codes #388

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9f8866e
Add Four new Covid-19 Vaccine Codes
bencap Sep 5, 2024
ce297c6
Add Novavax Display
bencap Sep 5, 2024
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13 changes: 12 additions & 1 deletion lib/seattleflu/id3c/cli/command/etl/redcap_det_uw_retrospectives.py
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Original file line number Diff line number Diff line change
Expand Up @@ -305,6 +305,8 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]

# COVID-19 vaccine CVX codes were sourced from here:
# https://www.cdc.gov/vaccines/programs/iis/COVID-19-related-codes.html
# this link has moved:
# https://www.cdc.gov/iis/code-sets/covid-19-related-codes.html
cvx_codes = {
88: {
"system": "http://hl7.org/fhir/sid/cvx",
Expand Down Expand Up @@ -389,7 +391,7 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]
309: {
"system": "http://hl7.org/fhir/sid/cvx",
"code": "309",
"display": "COVID-19, mRNA, LNP-S, PF, tris-sucrose, 30 mcg/0.3 mL"
"display": "COVID-19, mRNA, LNP-S, PF, tris-sucrose, 30 mcg/0.3 mL"
},
311: {
"system": "http://hl7.org/fhir/sid/cvx",
Expand All @@ -401,6 +403,11 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]
"code": "312",
"display": "COVID-19, mRNA, LNP-S, PF, 50 mcg/0.5 mL"
},
313: {
"system": "http://hl7.org/fhir/sid/cvx",
"code": "313",
"display": "COVID-19 vaccine, Subunit, rS-nanoparticle, adjuvanted, PF, 5mcg/0.5mL"
},
511: {
"system": "http://hl7.org/fhir/sid/cvx",
"code": "511",
Expand Down Expand Up @@ -445,8 +452,12 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]
"covid-19 pfizer mrna bivalent 5-11 yrs old": 301,
"covid-19 pfizer mrna bivalent 6 mos-4 yrs old": 308,
"covid-19 pfizer mrna 2023-24 12 yrs and older (comirnaty)": 309,
"covid-19 pfizer mrna 12 yrs and older (comirnaty)": 309,
"covid-19 moderna mrna 2023-24 6 mos-11 yrs old": 311,
"covid-19 moderna mrna 6 mos-11 yrs old": 311,
"covid-19 moderna mrna 2023-24 12 yrs and older (spikevax)": 312,
"covid-19 moderna mrna 12 yrs and older (spikevax)": 312,
"covid-19 novavax subunit adjuvanted monovalent": 313,
"covid-19 sinovac inactivated, non-us (coronavac)": 511,
"": None
}
Expand Down
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