Bio-image Analysis Quality Control

This repository contains a Python package to perform automatic quality control for bioimage analysis.

Table of Contents

• Installation
• Usage
• Features
• Examples
• Contributing
• License

Installation

To install the required dependencies, run:

pip install -r [requirements.txt](requirements.txt)

Usage

To use the package, you can run the main application:

python biaqc-app.py

GUI

The main graphical user interface (GUI) can be accessed by running the biaqc-app.py script. The GUI allows you to open folders, run analysis, and visualize results.

Features

• Automatic Quality Control: Perform automatic quality control for bioimage analysis.
• Feature Extraction: Extract features from bioimages.
• Metadata Analysis: Analyze metadata associated with bioimages.
• Graphical User Interface: User-friendly GUI for easy interaction.
• CSV Support: Load and save results in CSV format.

Contributing

Contributions are welcome! Please see the CONTRIBUTING.md file for guidelines on how to contribute to this project.

License

This project is licensed under the MIT License. See the LICENSE file for more details.