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MAINT: pkg_resources deprecation #237

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merged 2 commits into from
Mar 21, 2025
Merged

MAINT: pkg_resources deprecation #237

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MAINT: pkg_resources deprecation
lizgehret Mar 13, 2025
93431e4
oops
lizgehret Mar 13, 2025
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5 changes: 2 additions & 3 deletions q2_sample_classifier/tests/test_base_class.py
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Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@
# The full license is in the file LICENSE, distributed with this software.
# ----------------------------------------------------------------------------
import tempfile
import pkg_resources
import importlib

from qiime2.plugin.testing import TestPluginBase

Expand All @@ -23,5 +23,4 @@ def tearDown(self):
self.temp_dir.cleanup()

def get_data_path(self, filename):
return pkg_resources.resource_filename(self.package,
'data/%s' % filename)
return importlib.resources.files(self.package) / 'data' / filename
4 changes: 2 additions & 2 deletions q2_sample_classifier/utilities.py
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Expand Up @@ -32,7 +32,7 @@
import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
import pkg_resources
import importlib
from scipy.sparse import issparse
from scipy.stats import randint
import biom
Expand Down Expand Up @@ -63,7 +63,7 @@
}


TEMPLATES = pkg_resources.resource_filename('q2_sample_classifier', 'assets')
TEMPLATES = importlib.resources.files('q2_sample_classifier') / 'assets'


def _extract_features(feature_data):
Expand Down
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