Fully automatic OpenSim kinematics

• Scaling:

  • No need for a static trial: scaling is done on the triangulated coordinates (trc file)
  • Remove 10% fastest frames (potential outliers)
  • Remove frames where coordinate speed is null (person probably out of frame)
  • Remove 40% most extreme calculated segment values (potential outliers)
  • For each segment, scale on the mean of the remaining segment values.

• IK: Just ran IK the same way as with the GUI

• Removed the logging.error written when an exception is caught: I wanted to make sure that tests don't pass when there is an issue.

• Changed "opensim" to "kinematics", as it is more general and speaks more to non-biomechanics users.

• Saved the OpenSim logs, that were otherwise lost.

• Removed the static trial, opensim_bin_path Config parameters as they are not needed.

• Also removed load_trc_name = 'filtered' (takes the filtered file if exists), and removed the IK_timeRange parameter (use project/frame_range instead)

• Removed the triangulation/reorder_trc option, which is not needed since we do not need to match people with static trials anymore (no more static trials)

Contributor: @peterlololsss --> Thank you!