Test Harpy Modules

revisit demultiplexing, sv cli commands (#191) #537

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Run time

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Job	Run time
Detect File Changes	5s
Build/Cache Container	17m 39s
demux gen1	4m 24s
deconvolve	4m 30s
align BWA	9m 39s
metassembly	19m 48s
align EMA	6m 46s
harpy extras	2m 48s
freebayes	4m 33s
impute	8m 28s
sv leviathan	4m 47s
mpileup	5m 57s
sv naibr	5m 35s
phase	6m 11s
preflight	4m 47s
qc	5m 7s
simulate linkedreads	13m 35s
simulate variants	6m 19s
align strobe	6m 38s
	2h 17m 36s