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Major POMA Update 2023 #12

Merged
merged 58 commits into from
Dec 6, 2023
Merged

Major POMA Update 2023 #12

merged 58 commits into from
Dec 6, 2023

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pcastellanoescuder
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  • New POMA theme and colorblind-friendly palette
  • Available sample normalization (sum and quantile)
  • New feature normalization methods
  • Extensive review and improvement of all POMA functions
  • Major documentation updates
  • Rename PomaSummarizedExperiment to PomaCreateObject
  • Auto-recognition of variable types and automatic variable re-labeling in PomaCreateObject
  • Available violin plots with PomaBoxplots
  • New functions PomaPCA and PomaPLS as stand-alone functions from the old PomaMultivariate (deprecated)
  • Other new functions: PomaLM, PomaLMM
  • Post-hoc pairwise comparisons in PomaUnivariate
  • Update tests and vignettes

@pcastellanoescuder pcastellanoescuder merged commit db6756f into master Dec 6, 2023
@pcastellanoescuder pcastellanoescuder deleted the devel branch December 8, 2023 15:42
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