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build_and_test_docker.yml
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Merge pull request #467 from pangenome/update_pansn_4cols build and test docker image #995: Commit 498c5d7 pushed by AndreaGuarracino
August 3, 2025 10:29 19m 22s master
master
August 3, 2025 10:29 19m 22s
optimize mapping process based on sequence count; use all-vs-all for … build and test docker image #994: Commit 8c16ebe pushed by AndreaGuarracino
August 3, 2025 10:08 18m 58s update_pansn_4cols
update_pansn_4cols
August 3, 2025 10:08 18m 58s
Merge pull request #466 from pangenome/update_pansn_4cols build and test docker image #993: Commit 5f826b1 pushed by AndreaGuarracino
August 1, 2025 10:15 18m 26s master
master
August 1, 2025 10:15 18m 26s
update PanSN regex to allow optional additional 3 or 4 pieces in naming build and test docker image #992: Commit 4a11095 pushed by AndreaGuarracino
August 1, 2025 09:47 19m 36s update_pansn_4cols
update_pansn_4cols
August 1, 2025 09:47 19m 36s
Merge pull request #458 from pangenome/wfmash_023 build and test docker image #991: Commit 9ba0ea6 pushed by AndreaGuarracino
July 25, 2025 07:18 18m 46s master
master
July 25, 2025 07:18 18m 46s
update deps build and test docker image #990: Commit 47b7982 pushed by AndreaGuarracino
July 23, 2025 12:05 19m 12s wfmash_023
wfmash_023
July 23, 2025 12:05 19m 12s
Merge branch 'master' into wfmash_023 build and test docker image #989: Commit 5081f57 pushed by AndreaGuarracino
July 18, 2025 14:52 19m 49s wfmash_023
wfmash_023
July 18, 2025 14:52 19m 49s
Merge pull request #463 from pangenome/bgzip_for_paf_impg build and test docker image #988: Commit 306923a pushed by AndreaGuarracino
July 18, 2025 14:51 21m 49s master
master
July 18, 2025 14:51 21m 49s
compress PAF files with bgzip (for impg) build and test docker image #987: Commit 956016e pushed by AndreaGuarracino
July 18, 2025 14:02 20m 41s bgzip_for_paf_impg
bgzip_for_paf_impg
July 18, 2025 14:02 20m 41s
fix: append '#' to target prefix build and test docker image #986: Commit b649714 pushed by AndreaGuarracino
June 11, 2025 18:25 20m 52s wfmash_023
wfmash_023
June 11, 2025 18:25 20m 52s
fix: update PGGB release version to v0.7.4 build and test docker image #985: Commit f3aa15a pushed by AndreaGuarracino
June 4, 2025 23:20 21m 14s master
master
June 4, 2025 23:20 21m 14s
fix: update PGGB release version to v0.7.4 build and test docker image #984: Commit 99113ac pushed by AndreaGuarracino
June 4, 2025 23:20 20m 56s wfmash_023
wfmash_023
June 4, 2025 23:20 20m 56s
update vcflib build and test docker image #983: Commit 7007677 pushed by AndreaGuarracino
June 2, 2025 18:11 19m 48s wfmash_023
wfmash_023
June 2, 2025 18:11 19m 48s
add threads to gfaffix build and test docker image #982: Commit 3f40859 pushed by AndreaGuarracino
May 24, 2025 21:06 22m 35s wfmash_023
wfmash_023
May 24, 2025 21:06 22m 35s
fix: enhance mapping process by handling unique prefixes and merging … build and test docker image #981: Commit 2340da2 pushed by AndreaGuarracino
May 24, 2025 01:36 22m 15s wfmash_023
wfmash_023
May 24, 2025 01:36 22m 15s
fix: update command for DRB1-3123 dataset abPOA test in build_and_tes… build and test docker image #980: Commit 947e95b pushed by AndreaGuarracino
May 19, 2025 12:58 22m 3s wfmash_023
wfmash_023
May 19, 2025 12:58 22m 3s
add -b\--batch-size; fix partition-before-pggb build and test docker image #979: Commit fcd45c8 pushed by AndreaGuarracino
May 18, 2025 20:47 17m 46s wfmash_023
wfmash_023
May 18, 2025 20:47 17m 46s
update wfmash build and test docker image #978: Commit 9a106ee pushed by AndreaGuarracino
May 18, 2025 20:46 21m 23s wfmash_023
wfmash_023
May 18, 2025 20:46 21m 23s
update wfmash build and test docker image #977: Commit 59405e3 pushed by AndreaGuarracino
May 17, 2025 14:35 20m 50s wfmash_023
wfmash_023
May 17, 2025 14:35 20m 50s
fix: correct LPA dataset parameters in build_and_test_docker.yml build and test docker image #976: Commit bce1f8e pushed by AndreaGuarracino
May 5, 2025 19:59 21m 14s wfmash_023
wfmash_023
May 5, 2025 19:59 21m 14s
fix: correct path for WFA2-lib Makefile in wfmash build process build and test docker image #975: Commit 439d0cf pushed by AndreaGuarracino
May 5, 2025 18:08 19m 21s wfmash_023
wfmash_023
May 5, 2025 18:08 19m 21s
update tools and pggb to support wfmash 0.23 build and test docker image #974: Commit aecbbcf pushed by AndreaGuarracino
May 5, 2025 18:02 2m 25s wfmash_023
wfmash_023
May 5, 2025 18:02 2m 25s
Merge pull request #457 from pangenome/update_stuff build and test docker image #973: Commit 4a7e00c pushed by AndreaGuarracino
May 1, 2025 17:30 22m 21s master
master
May 1, 2025 17:30 22m 21s
update smoothxg build and test docker image #972: Commit 99e9e67 pushed by AndreaGuarracino
May 1, 2025 16:57 22m 31s update_stuff
update_stuff
May 1, 2025 16:57 22m 31s
Merge pull request #455 from alancleary/partition-poa-params-fix build and test docker image #971: Commit 86f34ad pushed by AndreaGuarracino
April 29, 2025 16:54 22m 37s master
master
April 29, 2025 16:54 22m 37s