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    26 repositories

    • wobbegong-kana

      Public
      JavaScript
      •0•0•0•0•Updated Feb 25, 2025Feb 25, 2025

    • wobbegong-R

      Public
      Generate wobbegong-formatted files for querying SummarizedExperiments
      wobbegong
      R
      •
      Other
      •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

    • wobbegong-logo

      Public
      Logo for wobbegong-related code
      wobbegong
      MIT License
      •0•0•0•0•Updated Dec 5, 2024Dec 5, 2024

    • wobbegong.js

      Public
      Client-side queries on SummarizedExperiments using the wobbegong format
      wobbegong
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Dec 4, 2024Dec 4, 2024

    • scran.js

      Public
      Single cell analysis in Javascript
      webassemblysingle-cell
      JavaScript
      •
      MIT License
      •3•21•0•0•Updated Oct 15, 2024Oct 15, 2024

    • emcmake-docker

      Public
      Docker image for Emscripten + Cmake
      Dockerfile
      •
      MIT License
      •0•0•0•0•Updated Oct 2, 2024Oct 2, 2024

    • igraph-wasm

      Public
      Compiled Wasm binaries for the igraph C library
      CMake
      •0•4•0•0•Updated Oct 1, 2024Oct 1, 2024

    • bakana-remotes

      Public
      Remote readers for the bakana scRNA-seq analysis pipeline
      JavaScript
      •0•0•0•0•Updated May 5, 2024May 5, 2024

    • bakana-takane

      Public
      bakana extensions for takane-formatted datasets
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated May 2, 2024May 2, 2024

    • scran.js-docker

      Public
      Docker image for building scran.js
      Dockerfile
      •
      MIT License
      •0•0•0•0•Updated May 1, 2024May 1, 2024

    • bakana

      Public
      Backend compute for kana
      JavaScript
      •
      MIT License
      •0•4•1•0•Updated Apr 29, 2024Apr 29, 2024

    • kana

      Public
      Single cell analysis in the browser
      bioinformaticsrna-seqexploratory-data-analysiswebassemblyinteractive-analysissingle-cellinteractive-visualizationscite-seq
      JavaScript
      •
      MIT License
      •13•142•27•1•Updated Apr 24, 2024Apr 24, 2024

    • kana-paper

      Public
      Manuscript for kana
      TeX
      •0•1•0•0•Updated Jan 22, 2024Jan 22, 2024

    • .github

      Public
      R
      •0•0•0•0•Updated Aug 11, 2023Aug 11, 2023

    • libhdf5-wasm

      Public
      Build HDF5 in WebAssembly
      CMake
      •
      Other
      •5•0•0•0•Updated Jul 17, 2023Jul 17, 2023

    • singlepp-references

      Public
      Reference datasets to use with the singlepp algorithm
      R
      •0•1•0•0•Updated Apr 29, 2023Apr 29, 2023

    • kanaverse.github.io

      Public
      0•0•0•0•Updated Apr 14, 2023Apr 14, 2023

    • kana-v3-dev

      Public archive
      JavaScript
      •0•0•0•0•Updated Apr 11, 2023Apr 11, 2023

    • kana-special-features

      Public
      Lists of special features for use in kana.
      R
      •
      MIT License
      •0•0•0•0•Updated Feb 23, 2023Feb 23, 2023

    • kana-feature-sets

      Public
      Prebuilt feature sets for use in kana's GSEA
      R
      •
      MIT License
      •0•0•0•0•Updated Feb 23, 2023Feb 23, 2023

    • random-test-files

      Public
      Random files for testing web applications.
      R
      •0•0•0•0•Updated Feb 19, 2023Feb 19, 2023

    • kana-formats

      Public
      Format descriptions for kana's exported state.
      JavaScript
      •0•0•0•0•Updated Jan 1, 2023Jan 1, 2023

    • valkana

      Public
      Validating the kana state files
      JavaScript
      •0•0•0•0•Updated Jan 1, 2023Jan 1, 2023

    • kanaval

      Public
      Specification-as-code validator for the kana format.
      C++
      •
      MIT License
      •0•0•1•0•Updated Dec 31, 2022Dec 31, 2022

    • kanapi

      Public
      API layer to analyze single cell RNA-seq analysis in node
      kana
      JavaScript
      •0•1•1•0•Updated Jun 30, 2022Jun 30, 2022

    • kana.perf

      Public
      JavaScript
      •0•0•0•1•Updated Feb 1, 2022Feb 1, 2022