Skip to content

@MIC-DKFZ MIC-DKFZ

Change the repository type filter

All

    Repositories list

    83 repositories

    • napari-labels

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 27, 2025Mar 27, 2025

    • napari-camera

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 27, 2025Mar 27, 2025

    • napari-nninteractive

      Public
      Python
      •
      Apache License 2.0
      •9•55•4•2•Updated Mar 26, 2025Mar 26, 2025

    • batchgenerators

      Public
      A framework for data augmentation for 2D and 3D image classification and segmentation
      Jupyter Notebook
      •
      Apache License 2.0
      •226•1.1k•39•12•Updated Mar 25, 2025Mar 25, 2025

    • napari_toolkit

      Public
      Python
      •
      Apache License 2.0
      •2•3•0•0•Updated Mar 24, 2025Mar 24, 2025

    • nnInteractive

      Public
      Python
      •
      Apache License 2.0
      •9•90•2•0•Updated Mar 23, 2025Mar 23, 2025

    • radioactive

      Public
      Python
      •
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated Mar 21, 2025Mar 21, 2025

    • LongiSeg

      Public
      Python
      •
      Apache License 2.0
      •0•4•0•0•Updated Mar 21, 2025Mar 21, 2025

    • nnssl

      Public
      0•0•0•0•Updated Mar 19, 2025Mar 19, 2025

    • LesionLocator

      Public
      1•19•2•0•Updated Mar 17, 2025Mar 17, 2025

    • Longitudinal-Difference-Weighting

      Public
      Longitudinal Segmentation of MS Lesions via Temporal Difference Weighting
      Python
      •
      Apache License 2.0
      •0•4•0•0•Updated Mar 14, 2025Mar 14, 2025

    • dynamic-network-architectures

      Public
      Python
      •
      Apache License 2.0
      •37•96•3•1•Updated Mar 14, 2025Mar 14, 2025

    • image_classification

      Public
      🎯 Deep Learning Framework for Image Classification & Regression in Pytorch for Fast Experiments
      frameworkcomputer-visionlightningimage-processingregressioncnnhydraclassificationimagenetimage-classification
      Python
      •
      Apache License 2.0
      •2•47•0•0•Updated Mar 7, 2025Mar 7, 2025

    • miccai2024_midi-b-submission

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •0•3•0•0•Updated Mar 6, 2025Mar 6, 2025

    • acvl_utils

      Public
      Python
      •3•11•3•2•Updated Feb 26, 2025Feb 26, 2025

    • nnUNet

      Public
      segmentation
      Python
      •
      Apache License 2.0
      •1.9k•6.5k•274•25•Updated Feb 25, 2025Feb 25, 2025

    • predictive_image_biomarker_analysis

      Public
      Code for the paper "Enhancing predictive imaging biomarker discovery through treatment effect analysis", which can be used for training and evaluating CATE estimation models for identifying predictive imaging biomarkers from pre-treatment images.
      Python
      •
      Apache License 2.0
      •1•2•0•0•Updated Feb 24, 2025Feb 24, 2025

    • ToothSeg

      Public
      Python
      •0•3•0•0•Updated Feb 19, 2025Feb 19, 2025

    • iScience_GlioLymph_classification

      Public
      Python
      •
      Other
      •0•0•0•0•Updated Feb 17, 2025Feb 17, 2025

    • batchgeneratorsv2

      Public
      Python
      •
      Apache License 2.0
      •8•18•0•2•Updated Feb 13, 2025Feb 13, 2025

    • segmentation_failures_benchmark

      Public
      Python
      •
      Apache License 2.0
      •2•11•1•0•Updated Feb 12, 2025Feb 12, 2025

    • niicat

      Public
      This is a tool to quickly preview nifti images on the terminal
      Python
      •
      GNU General Public License v2.0
      •11•59•2•1•Updated Feb 5, 2025Feb 5, 2025

    • Foreground-and-Anonymization-Area-Segmentation

      Public
      Other
      •0•0•0•0•Updated Jan 20, 2025Jan 20, 2025

    • MedVol

      Public
      Python
      •
      Apache License 2.0
      •0•16•0•0•Updated Dec 29, 2024Dec 29, 2024

    • HD-BET

      Public
      MRI brain extraction tool
      Python
      •
      Apache License 2.0
      •70•324•25•7•Updated Dec 18, 2024Dec 18, 2024

    • ADetect

      Public
      "Automated detection of aortic dissections (AD) from CT scans using deep segmentation and optimized thresholding. Applicable in emergency clinical settings, for research purposes only."
      Python
      •
      Apache License 2.0
      •0•3•0•0•Updated Dec 9, 2024Dec 9, 2024

    • MultiTalent

      Public
      Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"
      Python
      •
      Apache License 2.0
      •3•54•1•0•Updated Dec 3, 2024Dec 3, 2024

    • MedSAMCodingPowerUnit

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 26, 2024Nov 26, 2024

    • mario

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 22, 2024Nov 22, 2024

    • napari-nifti

      Public
      Python
      •
      Apache License 2.0
      •1•4•1•0•Updated Nov 18, 2024Nov 18, 2024