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Pull requests list

Bump anndata and mudata [ci force]
#1111 opened Dec 8, 2025 by DriesSchaumont Loading…
3 of 10 tasks
Update cellranger multi conversion to support Cell Ranger v10
#1109 opened Dec 5, 2025 by DriesSchaumont • Draft
10 tasks
Docker's --mount=type=secret only applies to one RUN instruction
#1108 opened Dec 5, 2025 by DriesSchaumont Loading…
4 of 10 tasks
Scanvi model
#1104 opened Nov 27, 2025 by dorien-er Loading…
4 of 10 tasks
mapping/cellranger_multi: bump Cell Ranger to version 10
#1103 opened Nov 25, 2025 by DriesSchaumont Loading…
10 tasks
Refactor totalvi
#1092 opened Oct 21, 2025 by dorien-er Loading…
5 of 10 tasks
1
make gene name sanitation optional
#1084 opened Oct 9, 2025 by dorien-er Loading…
4 of 10 tasks
13
Update scanpy and related components
#1074 opened Sep 15, 2025 by DriesSchaumont • Draft
10 tasks
Update file examples
#1067 opened Aug 22, 2025 by dorien-er Loading…
10 tasks
4
ingestion/cellranger_multi: avoid publishing duplicate Cell Ranger output
#1048 opened Jul 10, 2025 by DriesSchaumont • Draft
4 of 10 tasks
openproblems interoperability POC
#883 opened Sep 20, 2024 by rcannood • Draft
10 tasks
Add atac_marker_peaks component
#879 opened Sep 17, 2024 by VladimirShitov Loading…
3 of 10 tasks
3.0.0
@DriesSchaumont
3
Add dsb component
#588 opened Oct 17, 2023 by wxicu • Draft
5 of 10 tasks
@rcannood
9
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