Skip to content

Commit 9279f5b

Browse files
Deploy for release 0.6.2 from b1b2fc3
1 parent 83c9a72 commit 9279f5b

File tree

279 files changed

+366
-353
lines changed

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

279 files changed

+366
-353
lines changed

src/qc/calculate_qc_metrics/config.vsh.yaml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -50,7 +50,7 @@ functionality:
5050
multiple_sep: ','
5151
example: "ercc,highly_variable"
5252
- name: "--top_n_vars"
53-
type: string
53+
type: integer
5454
description: |
5555
Number of top vars to be used to calculate cumulative proportions.
5656
If not specified, proportions are not calculated. `--top_n_vars 20,50` finds

target/docker/cluster/leiden/.config.vsh.yaml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -182,5 +182,5 @@ info:
182182
output: "/home/runner/work/openpipeline/openpipeline/target/docker/cluster/leiden"
183183
executable: "/home/runner/work/openpipeline/openpipeline/target/docker/cluster/leiden/leiden"
184184
viash_version: "0.6.7"
185-
git_commit: "2366c30f34c6fca5c5bea76fc1f65f655640cd85"
185+
git_commit: "b1b2fc369df43d5892e67e169c984c709650b5c5"
186186
git_remote: "https://github.com/openpipelines-bio/openpipeline"

target/docker/cluster/leiden/leiden

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -433,9 +433,9 @@ RUN pip install --upgrade pip && \
433433
434434
LABEL org.opencontainers.image.authors="Dries De Maeyer"
435435
LABEL org.opencontainers.image.description="Companion container for running component cluster leiden"
436-
LABEL org.opencontainers.image.created="2023-01-18T16:07:15Z"
436+
LABEL org.opencontainers.image.created="2023-01-19T08:39:36Z"
437437
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
438-
LABEL org.opencontainers.image.revision="2366c30f34c6fca5c5bea76fc1f65f655640cd85"
438+
LABEL org.opencontainers.image.revision="b1b2fc369df43d5892e67e169c984c709650b5c5"
439439
LABEL org.opencontainers.image.version="0.6.2"
440440
VIASHDOCKER
441441
}

target/docker/compression/tar_extract/.config.vsh.yaml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -106,5 +106,5 @@ info:
106106
output: "/home/runner/work/openpipeline/openpipeline/target/docker/compression/tar_extract"
107107
executable: "/home/runner/work/openpipeline/openpipeline/target/docker/compression/tar_extract/tar_extract"
108108
viash_version: "0.6.7"
109-
git_commit: "2366c30f34c6fca5c5bea76fc1f65f655640cd85"
109+
git_commit: "b1b2fc369df43d5892e67e169c984c709650b5c5"
110110
git_remote: "https://github.com/openpipelines-bio/openpipeline"

target/docker/compression/tar_extract/tar_extract

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -403,9 +403,9 @@ FROM ubuntu:latest
403403
404404
RUN :
405405
LABEL org.opencontainers.image.description="Companion container for running component compression tar_extract"
406-
LABEL org.opencontainers.image.created="2023-01-18T16:07:16Z"
406+
LABEL org.opencontainers.image.created="2023-01-19T08:39:36Z"
407407
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
408-
LABEL org.opencontainers.image.revision="2366c30f34c6fca5c5bea76fc1f65f655640cd85"
408+
LABEL org.opencontainers.image.revision="b1b2fc369df43d5892e67e169c984c709650b5c5"
409409
LABEL org.opencontainers.image.version="0.6.2"
410410
VIASHDOCKER
411411
}

target/docker/convert/from_10xh5_to_h5mu/.config.vsh.yaml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -231,5 +231,5 @@ info:
231231
output: "/home/runner/work/openpipeline/openpipeline/target/docker/convert/from_10xh5_to_h5mu"
232232
executable: "/home/runner/work/openpipeline/openpipeline/target/docker/convert/from_10xh5_to_h5mu/from_10xh5_to_h5mu"
233233
viash_version: "0.6.7"
234-
git_commit: "2366c30f34c6fca5c5bea76fc1f65f655640cd85"
234+
git_commit: "b1b2fc369df43d5892e67e169c984c709650b5c5"
235235
git_remote: "https://github.com/openpipelines-bio/openpipeline"

target/docker/convert/from_10xh5_to_h5mu/from_10xh5_to_h5mu

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -419,9 +419,9 @@ RUN pip install --upgrade pip && \
419419
420420
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
421421
LABEL org.opencontainers.image.description="Companion container for running component convert from_10xh5_to_h5mu"
422-
LABEL org.opencontainers.image.created="2023-01-18T16:07:13Z"
422+
LABEL org.opencontainers.image.created="2023-01-19T08:39:33Z"
423423
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
424-
LABEL org.opencontainers.image.revision="2366c30f34c6fca5c5bea76fc1f65f655640cd85"
424+
LABEL org.opencontainers.image.revision="b1b2fc369df43d5892e67e169c984c709650b5c5"
425425
LABEL org.opencontainers.image.version="0.6.2"
426426
VIASHDOCKER
427427
}

target/docker/convert/from_10xmtx_to_h5mu/.config.vsh.yaml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -117,5 +117,5 @@ info:
117117
output: "/home/runner/work/openpipeline/openpipeline/target/docker/convert/from_10xmtx_to_h5mu"
118118
executable: "/home/runner/work/openpipeline/openpipeline/target/docker/convert/from_10xmtx_to_h5mu/from_10xmtx_to_h5mu"
119119
viash_version: "0.6.7"
120-
git_commit: "2366c30f34c6fca5c5bea76fc1f65f655640cd85"
120+
git_commit: "b1b2fc369df43d5892e67e169c984c709650b5c5"
121121
git_remote: "https://github.com/openpipelines-bio/openpipeline"

target/docker/convert/from_10xmtx_to_h5mu/from_10xmtx_to_h5mu

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -397,9 +397,9 @@ RUN pip install --upgrade pip && \
397397
398398
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
399399
LABEL org.opencontainers.image.description="Companion container for running component convert from_10xmtx_to_h5mu"
400-
LABEL org.opencontainers.image.created="2023-01-18T16:07:13Z"
400+
LABEL org.opencontainers.image.created="2023-01-19T08:39:33Z"
401401
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
402-
LABEL org.opencontainers.image.revision="2366c30f34c6fca5c5bea76fc1f65f655640cd85"
402+
LABEL org.opencontainers.image.revision="b1b2fc369df43d5892e67e169c984c709650b5c5"
403403
LABEL org.opencontainers.image.version="0.6.2"
404404
VIASHDOCKER
405405
}

target/docker/convert/from_bd_to_10x_molecular_barcode_tags/.config.vsh.yaml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -124,5 +124,5 @@ info:
124124
output: "/home/runner/work/openpipeline/openpipeline/target/docker/convert/from_bd_to_10x_molecular_barcode_tags"
125125
executable: "/home/runner/work/openpipeline/openpipeline/target/docker/convert/from_bd_to_10x_molecular_barcode_tags/from_bd_to_10x_molecular_barcode_tags"
126126
viash_version: "0.6.7"
127-
git_commit: "2366c30f34c6fca5c5bea76fc1f65f655640cd85"
127+
git_commit: "b1b2fc369df43d5892e67e169c984c709650b5c5"
128128
git_remote: "https://github.com/openpipelines-bio/openpipeline"

0 commit comments

Comments
 (0)