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add cnmf quality params #628

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Merged
merged 2 commits into from
Mar 27, 2024
Merged

add cnmf quality params #628

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7b3f114
add cnmf quality params
ReiHashimoto Mar 27, 2024
e232fef
Merge pull request #320 from arayabrain/feature/cnmf-quality-params
ReiHashimoto Mar 27, 2024
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12 changes: 12 additions & 0 deletions studio/app/optinist/wrappers/caiman/params/caiman_cnmf.yaml
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Expand Up @@ -110,3 +110,15 @@ advanced:
do_merge: True
merge_parallel: False
max_merge_area: null

quality_evaluation_params:
SNR_lowest: 0.5
cnn_lowest: 0.1
gSig_range: null
min_SNR: 2.5
min_cnn_thr: 0.9
rval_lowest: -1
rval_thr: 0.8
use_cnn: True
use_ecc: False
max_ecc: 3