initial commit skeleton

.gitignore

@@ -0,0 +1,6 @@
+*-
+*~
+/.jekyll-cache/
+/_site/
+/node_modules/
+/vendor/

.nvmrc

@@ -0,0 +1 @@
+v12.16.3

.ruby-version

@@ -0,0 +1 @@
+2.7.1

404.html

@@ -0,0 +1,25 @@
+---
+permalink: /404.html
+layout: default
+---
+
+<style type="text/css" media="screen">
+  .container {
+    margin: 10px auto;
+    max-width: 600px;
+    text-align: center;
+  }
+  h1 {
+    margin: 30px 0;
+    font-size: 4em;
+    line-height: 1;
+    letter-spacing: -1px;
+  }
+</style>
+
+<div class="container">
+  <h1>404</h1>
+
+  <p><strong>Page not found :(</strong></p>
+  <p>The requested page could not be found.</p>
+</div>

Gemfile

@@ -0,0 +1,3 @@
+source 'https://rubygems.org'
+
+gem "jekyll"

Gemfile.lock

@@ -0,0 +1,67 @@
+GEM
+  remote: https://rubygems.org/
+  specs:
+    addressable (2.7.0)
+      public_suffix (>= 2.0.2, < 5.0)
+    colorator (1.1.0)
+    concurrent-ruby (1.1.6)
+    em-websocket (0.5.1)
+      eventmachine (>= 0.12.9)
+      http_parser.rb (~> 0.6.0)
+    eventmachine (1.2.7)
+    ffi (1.12.2)
+    forwardable-extended (2.6.0)
+    http_parser.rb (0.6.0)
+    i18n (1.8.2)
+      concurrent-ruby (~> 1.0)
+    jekyll (4.0.1)
+      addressable (~> 2.4)
+      colorator (~> 1.0)
+      em-websocket (~> 0.5)
+      i18n (>= 0.9.5, < 2)
+      jekyll-sass-converter (~> 2.0)
+      jekyll-watch (~> 2.0)
+      kramdown (~> 2.1)
+      kramdown-parser-gfm (~> 1.0)
+      liquid (~> 4.0)
+      mercenary (~> 0.3.3)
+      pathutil (~> 0.9)
+      rouge (~> 3.0)
+      safe_yaml (~> 1.0)
+      terminal-table (~> 1.8)
+    jekyll-sass-converter (2.1.0)
+      sassc (> 2.0.1, < 3.0)
+    jekyll-watch (2.2.1)
+      listen (~> 3.0)
+    kramdown (2.2.1)
+      rexml
+    kramdown-parser-gfm (1.1.0)
+      kramdown (~> 2.0)
+    liquid (4.0.3)
+    listen (3.2.1)
+      rb-fsevent (~> 0.10, >= 0.10.3)
+      rb-inotify (~> 0.9, >= 0.9.10)
+    mercenary (0.3.6)
+    pathutil (0.16.2)
+      forwardable-extended (~> 2.6)
+    public_suffix (4.0.5)
+    rb-fsevent (0.10.4)
+    rb-inotify (0.10.1)
+      ffi (~> 1.0)
+    rexml (3.2.4)
+    rouge (3.18.0)
+    safe_yaml (1.0.5)
+    sassc (2.3.0)
+      ffi (~> 1.9)
+    terminal-table (1.8.0)
+      unicode-display_width (~> 1.1, >= 1.1.1)
+    unicode-display_width (1.7.0)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  jekyll
+
+BUNDLED WITH
+   2.1.4

License.txt

@@ -0,0 +1 @@
+Copyright 2020. Rehabilitation Research Institute of Singapore. All Rights Reserved.

Rakefile

@@ -0,0 +1,36 @@
+
+desc 'build the jekyll app'
+task :build do
+  sh "bundle exec jekyll build --trace"
+end
+
+desc 'clean _site'
+task :clean do
+  sh "rm -rf _site"
+end
+
+desc "bundle doctor"
+task :bcheck do
+  sh "bundle doctor"
+end
+
+desc "update bootstrap"
+task :bootstrap do
+  # need to do npm update or upgrade first
+  sh "rsync -av node_modules/bootstrap/dist/ assets/"
+  sh "rsync -av node_modules/jquery/dist/ assets/js/"
+  sh "rsync -av node_modules/@popperjs/core/dist/umd/ assets/js/"
+end
+
+desc 'jekyll doctor'
+task :check do
+  sh "bundle exec jekyll doctor"
+end
+
+desc 'serve the jekyll app at localhost:4000'
+task :start do
+  sh "bundle exec jekyll serve --trace"
+end
+
+desc "default is build only"
+task :default  => [ :build ]

_authors/jill.md

@@ -0,0 +1,6 @@
+---
+short_name: jill
+name: Jill Smith
+position: Chief Editor
+---
+Jill is an avid fruit grower based in the south of France.

_authors/ted.md

@@ -0,0 +1,6 @@
+---
+short_name: ted
+name: Ted Doe
+position: Writer
+---
+Ted has been eating fruit since he was baby.

_config.yml

@@ -0,0 +1,85 @@
+# Welcome to Jekyll!
+#
+# This config file is meant for settings that affect your whole blog, values
+# which you are expected to set up once and rarely edit after that. If you find
+# yourself editing this file very often, consider using Jekyll's data files
+# feature for the data you need to update frequently.
+#
+# For technical reasons, this file is *NOT* reloaded automatically when you use
+# 'bundle exec jekyll serve'. If you change this file, please restart the server process.
+#
+# If you need help with YAML syntax, here are some quick references for you: 
+# https://learn-the-web.algonquindesign.ca/topics/markdown-yaml-cheat-sheet/#yaml
+# https://learnxinyminutes.com/docs/yaml/
+#
+# Site settings
+# These are used to personalize your new site. If you look in the HTML files,
+# you will see them accessed via {{ site.title }}, {{ site.email }}, and so on.
+# You can create any custom variable you would like, and they will be accessible
+# in the templates via {{ site.myvariable }}.
+
+title: RRIS
+email: [email protected]
+description: >- # this means to ignore newlines until "baseurl:"
+  Rehabilitation Research Institute of Singapore
+port: 4000
+host: 0.0.0.0
+
+baseurl: "" # the subpath of your site, e.g. /blog
+url: "" # the base hostname & protocol for your site, e.g. http://example.com
+#twitter_username: jekyllrb
+#github_username:  jekyll
+
+# Build settings
+# theme: jekyll-theme-minimal
+#theme: minima
+#plugins:
+#  - jekyll-feed
+
+
+sass:
+ sass_dir: _sass
+ style: compressed
+
+include: [ ]
+
+exclude: [ Rakefile, Ref, node_modules ]
+# Exclude from processing.
+# The following items will not be processed, by default.
+# Any item listed under the `exclude:` key here will be automatically added to
+# the internal "default list".
+#
+# Excluded items can be processed by explicitly listing the directories or
+# their entries' file path in the `include:` list.
+#
+# exclude:
+#   - .sass-cache/
+#   - .jekyll-cache/
+#   - gemfiles/
+#   - Gemfile
+#   - Gemfile.lock
+#   - node_modules/
+#   - vendor/bundle/
+#   - vendor/cache/
+#   - vendor/gems/
+#   - vendor/ruby/
+
+collections:
+  authors:
+    output: true
+
+defaults:
+  - scope:
+      path: ""
+      type: "authors"
+    values:
+      layout: "author"
+  - scope:
+      path: ""
+      type: "posts"
+    values:
+      layout: "post"
+  - scope:
+      path: ""
+    values:
+      layout: "default"

_data/nav.yml

@@ -0,0 +1,8 @@
+- name: Home
+  link: /home.html
+- name: About
+  link: /about.html
+- name: Staff
+  link: /staff.html
+- name: Blog
+  link: /blog.html

_includes/disqus_comments.html

@@ -0,0 +1,20 @@
+{%- if page.comments != false and jekyll.environment == "production" -%}
+
+  <div id="disqus_thread"></div>
+  <script>
+    var disqus_config = function () {
+      this.page.url = '{{ page.url | absolute_url }}';
+      this.page.identifier = '{{ page.url | absolute_url }}';
+    };
+
+    (function() {
+      var d = document, s = d.createElement('script');
+
+      s.src = 'https://{{ site.disqus.shortname }}.disqus.com/embed.js';
+
+      s.setAttribute('data-timestamp', +new Date());
+      (d.head || d.body).appendChild(s);
+    })();
+  </script>
+  <noscript>Please enable JavaScript to view the <a href="https://disqus.com/?ref_noscript" rel="nofollow">comments powered by Disqus.</a></noscript>
+{%- endif -%}

_includes/footer.html

@@ -0,0 +1,6 @@
+<footer class="site-footer h-card">
+  <hr>
+  <div class="container small">
+    &copy; 2020. Rehabilitation Research Institute of Singapore. All Rights Reserved.
+  </div>
+</footer>

_includes/google-analytics.html

@@ -0,0 +1,12 @@
+<script>
+if(!(window.doNotTrack === "1" || navigator.doNotTrack === "1" || navigator.doNotTrack === "yes" || navigator.msDoNotTrack === "1")) {
+  (function(i,s,o,g,r,a,m){i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){
+  (i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
+  m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
+  })(window,document,'script','https://www.google-analytics.com/analytics.js','ga');
+
+  ga('create', '{{ site.google_analytics }}', 'auto');
+  ga('send', 'pageview');
+}
+</script>
+

_includes/head.html

@@ -0,0 +1,10 @@
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1">
+  <link rel="stylesheet" href="{{ "/assets/css/bootstrap.min.css" | relative_url }}">
+  <link rel="stylesheet" href="{{ "/assets/css/style.css" | relative_url }}">
+  {%- if jekyll.environment == 'production' and site.google_analytics -%}
+    {%- include google-analytics.html -%}
+  {%- endif -%}
+</head>

_includes/header-pagelink-generator.html

@@ -0,0 +1,30 @@
+<header class="site-header" role="banner">
+
+  <div class="wrapper">
+    {%- assign default_paths = site.pages | map: "path" -%}
+    {%- assign page_paths = site.header_pages | default: default_paths -%}
+    <a class="site-title" rel="author" href="{{ "/" | relative_url }}">{{ site.title | escape }}</a>
+
+    {%- if page_paths -%}
+      <nav class="site-nav">
+        <input type="checkbox" id="nav-trigger" class="nav-trigger" />
+        <label for="nav-trigger">
+          <span class="menu-icon">
+            <svg viewBox="0 0 18 15" width="18px" height="15px">
+              <path d="M18,1.484c0,0.82-0.665,1.484-1.484,1.484H1.484C0.665,2.969,0,2.304,0,1.484l0,0C0,0.665,0.665,0,1.484,0 h15.032C17.335,0,18,0.665,18,1.484L18,1.484z M18,7.516C18,8.335,17.335,9,16.516,9H1.484C0.665,9,0,8.335,0,7.516l0,0 c0-0.82,0.665-1.484,1.484-1.484h15.032C17.335,6.031,18,6.696,18,7.516L18,7.516z M18,13.516C18,14.335,17.335,15,16.516,15H1.484 C0.665,15,0,14.335,0,13.516l0,0c0-0.82,0.665-1.483,1.484-1.483h15.032C17.335,12.031,18,12.695,18,13.516L18,13.516z"/>
+            </svg>
+          </span>
+        </label>
+
+        <div class="trigger">
+          {%- for path in page_paths -%}
+            {%- assign my_page = site.pages | where: "path", path | first -%}
+            {%- if my_page.title -%}
+            <a class="page-link" class="current" href="{{ my_page.url | relative_url }}">{{ my_page.title | escape }}</a>
+            {%- endif -%}
+          {%- endfor -%}
+        </div>
+      </nav>
+    {%- endif -%}
+  </div>
+</header>

_includes/header.html

@@ -0,0 +1,5 @@
+<header class="site-header" role="banner">
+  <div class="wrapper">
+    <a class="site-title" rel="author" href="{{ "/" | relative_url }}">{{ site.title | escape }}</a>
+  </div>
+</header>

_includes/icon-github.html

@@ -0,0 +1 @@
+<a href="https://github.com/{{ include.username }}"><span class="icon icon--github">{% include icon-github.svg %}</span><span class="username">{{ include.username }}</span></a>

_includes/icon-twitter.html

@@ -0,0 +1 @@
+<a href="https://twitter.com/{{ include.username }}"><span class="icon icon--twitter">{% include icon-twitter.svg %}</span><span class="username">{{ include.username }}</span></a>

_includes/nav.html

@@ -0,0 +1,17 @@
+<nav class="navbar navbar-expand-md navbar-dark bg-dark mb-4">
+  <a class="navbar-brand" href="/">RRIS</a>
+  <button class="navbar-toggler" type="button" data-toggle="collapse" data-target="#navbarCollapse" aria-controls="navbarCollapse" aria-expanded="false" aria-label="Toggle navigation">
+    <span class="navbar-toggler-icon"></span>
+  </button>
+  <div class="collapse navbar-collapse" id="navbarCollapse">
+    <ul class="navbar-nav mr-auto">
+  {% for item in site.data.nav%}
+    <li>
+      <a class="nav-link" href="{{ item.link }}" {% if page.url == item.link %}style="color: green;"{% endif %}>
+    {{ item.name }}
+    </a>
+    </li>
+  {% endfor %}
+    </ul>
+  </div>
+</nav>

_includes/nav2.html

@@ -0,0 +1,8 @@
+<nav>
+  <a href="/" {% if page.url == "/" %}style="color: red;"{% endif %}>
+    Home
+  </a>
+  <a href="/about.html" {% if page.url == "/about.html" %}style="color: red;"{% endif %}>
+    About
+  </a>
+</nav>

_includes/social.html

@@ -0,0 +1,14 @@
+<ul class="social-media-list">
+  {%- if site.dribbble_username -%}<li><a href="https://dribbble.com/{{ site.dribbble_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#dribbble' | relative_url }}"></use></svg> <span class="username">{{ site.dribbble_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.facebook_username -%}<li><a href="https://www.facebook.com/{{ site.facebook_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#facebook' | relative_url }}"></use></svg> <span class="username">{{ site.facebook_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.flickr_username -%}<li><a href="https://www.flickr.com/photos/{{ site.flickr_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#flickr' | relative_url }}"></use></svg> <span class="username">{{ site.flickr_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.github_username -%}<li><a href="https://github.com/{{ site.github_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#github' | relative_url }}"></use></svg> <span class="username">{{ site.github_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.instagram_username -%}<li><a href="https://instagram.com/{{ site.instagram_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#instagram' | relative_url }}"></use></svg> <span class="username">{{ site.instagram_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.linkedin_username -%}<li><a href="https://www.linkedin.com/in/{{ site.linkedin_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#linkedin' | relative_url }}"></use></svg> <span class="username">{{ site.linkedin_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.pinterest_username -%}<li><a href="https://www.pinterest.com/{{ site.pinterest_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#pinterest' | relative_url }}"></use></svg> <span class="username">{{ site.pinterest_username| escape }}</span></a></li>{%- endif -%}
+  {%- for mst in site.mastodon -%}{%- if mst.username and mst.instance -%}<li><a href="https://{{ mst.instance| cgi_escape | escape}}/@{{mst.username}}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#mastodon' | relative_url }}"></use></svg> <span class="username">{{ mst.username|escape }}</span></a></li>{%- endif -%}{%- endfor -%}
+  {%- if site.twitter_username -%}<li><a href="https://www.twitter.com/{{ site.twitter_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#twitter' | relative_url }}"></use></svg> <span class="username">{{ site.twitter_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.youtube_username -%}<li><a href="https://youtube.com/{{ site.youtube_username| cgi_escape | escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#youtube' | relative_url }}"></use></svg> <span class="username">{{ site.youtube_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.googleplus_username -%}<li><a href="https://plus.google.com/{{ site.googleplus_username| escape }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#googleplus' | relative_url }}"></use></svg> <span class="username">{{ site.googleplus_username| escape }}</span></a></li>{%- endif -%}
+  {%- if site.rss -%}<li><a href="{{ 'feed.xml' | relative_url }}"><svg class="svg-icon"><use xlink:href="{{ '/assets/minima-social-icons.svg#rss' | relative_url }}"></use></svg> <span>{{ site.rss | escape }}</span></a></li>{%- endif -%}
+</ul>