v1.8.0 - Optimistic Oostkamp

New features

1. Added watchpath functionality to the pipeline. Add the watch: prefix to a file basename in the samplesheet and the pipeline will automatically wait for the file to be created in the --watchdir directory (the lookup happens recursively)

Changes

1. Bumped the minimal support nextflow version to 24.04.0
2. Bumped all modules to the newest versions
3. The pipeline now also outputs csi indices
4. Rename the master branch to main
5. Low coverage regions (regions with less than 5 reads) are no longer considered for variant calling

Refactors

1. Updated the pipeline to the new linting guidelines
2. Removed check_max in favor of resourceLimits