Merge pull request #236 from nf-cmgg/fix-family-name

fix family name issues
nf-cmgg · Nov 25, 2024 · 1d12585 · 1d12585
2 parents fc16552 + 169c7a6
commit 1d12585
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/subworkflows/local/watchpath_handling/main.nf b/subworkflows/local/watchpath_handling/main.nf
@@ -40,7 +40,7 @@ workflow WATCHPATH_HANDLING {
             // Replace dots with underscores in sample and family names to prevent breaking the multiqc report
             row[0].id = row[0].id.replace(".", "_")
             row[0].sample = row[0].sample.replace(".", "_")
-            row[0].family = row[0].family.replace(".", "_")
+            row[0].family = row[0].family ? row[0].family.replace(".", "_") : row[0].family
 
             // Watchpath logic
             def is_watch = false