Fix #1665

nextstrain · Nov 9, 2024 · 75c7976 · 75c7976
1 parent 7c99d29
commit 75c7976
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Showing 4 changed files with 4 additions and 4 deletions.
diff --git a/tests/functional/ancestral/cram/infer-amino-acid-sequences-with-root-sequence.t b/tests/functional/ancestral/cram/infer-amino-acid-sequences-with-root-sequence.t
@@ -20,7 +20,7 @@ ancestor).
 Check that the reference length was correctly exported as the nuc annotation
 
   $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \
-  >   --exclude-regex-paths "['seqid']" -- \
+  >   --exclude-regex-paths "\['seqid'\]" -- \
   >   "$TESTDIR/../data/ancestral_mutations_with_root_sequence.json" \
   >   "$CRAMTMP/$TESTFILE/ancestral_mutations.json"
   {}
diff --git a/tests/functional/translate/cram/translate-with-gff-and-gene-name.t b/tests/functional/translate/cram/translate-with-gff-and-gene-name.t
@@ -26,7 +26,7 @@ Other than the sequence ids which will include a temporary path, the JSONs
 should be identical.
 
   $ python3 "${SCRIPTS}/diff_jsons.py" \
-  >  --exclude-regex-paths "['seqid']" -- \
+  >  --exclude-regex-paths "\['seqid'\]" -- \
   >  "${DATA}/zika/aa_muts_gff.json" \
   >  aa_muts.json
   {}
diff --git a/tests/functional/translate/cram/translate-with-gff-and-gene.t b/tests/functional/translate/cram/translate-with-gff-and-gene.t
@@ -23,7 +23,7 @@ Translate amino acids for genes using a GFF3 file where the gene names are store
   amino acid mutations written to .* (re)
 
   $ python3 "${SCRIPTS}/diff_jsons.py" \
-  >  --exclude-regex-paths "['seqid']" -- \
+  >  --exclude-regex-paths "\['seqid'\]" -- \
   >  "${DATA}/zika/aa_muts_gff.json" \
   >  aa_muts.json
   {}
diff --git a/tests/functional/translate/cram/translate-with-gff-and-locus-tag.t b/tests/functional/translate/cram/translate-with-gff-and-locus-tag.t
@@ -23,7 +23,7 @@ This is an identical test setup as `translate-with-gff-and-gene.t` but using loc
   amino acid mutations written to .* (re)
 
   $ python3 "${SCRIPTS}/diff_jsons.py" \
-  >  --exclude-regex-paths "['seqid']" -- \
+  >  --exclude-regex-paths "\['seqid'\]" -- \
   >  "${DATA}/zika/aa_muts_gff.json" \
   >  aa_muts.json
   {}