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Add support for extraction of signals using user-supplied mask #38

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Add support for extraction of signals using user-supplied mask #38

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c58fbba
Update data_loader to support extraction of signals using masks
m-miedema Jul 4, 2025
f8cdbd9
Merge branch 'main' into main
m-miedema Jul 23, 2025
a9aab64
update to demo notebook
m-miedema Jul 23, 2025
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96 changes: 78 additions & 18 deletions dFC_methods_demo.ipynb
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3 changes: 2 additions & 1 deletion pydfc/data_loader.py
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Original file line number Diff line number Diff line change
Expand Up @@ -361,11 +361,12 @@ def nifti2array(

return time_series, labels, locs


def nifti2timeseries(
nifti_file,
Fs,
subj_id,
n_rois=None,
mask_file=None,
confound_strategy="none",
masker_type="NiftiLabelsMasker",
n_rois=100,
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