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neurobagel / bagel-cli Public

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[FIX] Gracefully handle user providing phenotypic file as .csv#212

Merged

surchs merged 13 commits intomainneurobagel/bagel-cli:mainfrom surchs/issue90neurobagel/bagel-cli:surchs/issue90Copy head branch name to clipboard

Sep 26, 2023

+189-20

Conversation Commits13 (13)Checks Files changed

Commits

Commits on Sep 22, 2023

Setup basic pheno.tsv validation
surchs
committed
Also ensure that fake .tsv files get flagged
surchs
committed
Don't forget python3.9
surchs
committed
Use futures for python3.9 support
surchs
committed

Commits on Sep 25, 2023

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surchs
and
alyssadai
authored
Disallow all file endings other than .tsv
surchs
committed
Saner error handling and clearer descriptions
surchs
committed
Fix some more typos
surchs
committed
Merge branch 'main' into surchs/issue90
surchs
authored

Commits on Sep 26, 2023

Apply suggestions from code review

surchs
and
alyssadai
authored
Error out on single column input
surchs
committed
Merge branch 'main' into surchs/issue90
surchs
authored
Make new output API happy
surchs
committed

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