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Victoria Serova committed Nov 6, 2015
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4 changes: 2 additions & 2 deletions _includes/footer.html
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Expand Up @@ -101,5 +101,5 @@ <h1>Other NCBI resources</h1>
<a href="http://www.ncbi.nlm.nih.gov/home/about/policies.shtml">Policies and Guidelines</a> | <a href="http://www.ncbi.nlm.nih.gov/home/about/contact.shtml">Contact</a>
</div>
</div>
<script type="text/javascript" src="/book/default_files/InstrumentPageStarterJS.js"> </script>
<script type="text/javascript" src="/book/default_files/hfjs2.js"> </script>
<script type="text/javascript" src="/cxx-toolkit/default_files/InstrumentPageStarterJS.js"> </script>
<script type="text/javascript" src="/cxx-toolkit/default_files/hfjs2.js"> </script>
92 changes: 46 additions & 46 deletions _includes/header.html
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<!--
<div class="ncbi_logo" style="position:absolute; right:10px;">
<a class="img_link icnblk_img" title="NCBI" target="mainwindow" href="http://www.ncbi.nlm.nih.gov/">
<img class="source-thumb" src="/book/static/img/ncbi_logo1.png" alt="NCBI Home Page"/>
<img class="source-thumb" src="/cxx-toolkit/static/img/ncbi_logo1.png" alt="NCBI Home Page"/>
</a>
</div>
-->

<div class="ncbi_logo">
<a href="http://www.ncbi.nlm.nih.gov/" target="_blank">
<img title="NCBI Home Page" src="/book/static/img/ncbi_logo1.png">
<img title="NCBI Home Page" src="/cxx-toolkit/static/img/ncbi_logo1.png">
</a>
</div>

Expand All @@ -22,7 +22,7 @@ <h1 class="res_name">
<a href="/book" title="Table of Contents Page" id="toolkit_header">
<!--
<a class="img_link icnblk_img" title="Table of Contents Page" target="mainwindow" href="/book">
<img class="source-thumb" src="/book/static/img/th-toolkit-lrg.png" alt="Cover of The NCBI C++ Toolkit Book" height="100px" width="80px"/>
<img class="source-thumb" src="/cxx-toolkit/static/img/th-toolkit-lrg.png" alt="Cover of The NCBI C++ Toolkit Book" height="100px" width="80px"/>
-->
NCBI C++ Toolkit
</a>
Expand All @@ -37,7 +37,7 @@ <h1 class="res_name">
<input id="search_box" name="__symbol" placeholder="Search..." onkeypress="SymbolSearchKeyPress('toolkit',event)" type="text">
<label for="search_box" class="offscreen_noflow">Search term</label>
<div id="button-holder">
<img src="/book/static/img/search_icon.png" onclick="javasrcipt:SymbolSearch('toolkit');">
<img src="/cxx-toolkit/static/img/search_icon.png" onclick="javasrcipt:SymbolSearch('toolkit');">
</div>

</td></tr>
Expand Down Expand Up @@ -71,143 +71,143 @@ <h1 class="res_name">
<a href="../" class="right">Table of Contents Page</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/fm">Book Information</a>
<a href="/cxx-toolkit/pages/fm">Book Information</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/part1">Part 1. Overview</a>
<a href="/cxx-toolkit/pages/part1">Part 1. Overview</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/ch_intro">1. Introduction to the C++ Toolkit</a>
<a href="/cxx-toolkit/pages/ch_intro">1. Introduction to the C++ Toolkit</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_start">2. Getting Started</a>
<a href="/cxx-toolkit/pages/ch_start">2. Getting Started</a>
</li>
</ul>
</li>
<li class="half_rhythm">
<a href="/book/pages/part2">Part 2. Development Framework</a>
<a href="/cxx-toolkit/pages/part2">Part 2. Development Framework</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/ch_getcode_svn">3. Retrieve the Source Code (FTP and Subversion)</a>
<a href="/cxx-toolkit/pages/ch_getcode_svn">3. Retrieve the Source Code (FTP and Subversion)</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_config">4. Configure, Build, and Use the Toolkit</a>
<a href="/cxx-toolkit/pages/ch_config">4. Configure, Build, and Use the Toolkit</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_build">5. Working with Makefiles</a>
<a href="/cxx-toolkit/pages/ch_build">5. Working with Makefiles</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_proj">6. Project Creation and Management</a>
<a href="/cxx-toolkit/pages/ch_proj">6. Project Creation and Management</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_style">7. Programming Policies and Guidelines</a>
<a href="/cxx-toolkit/pages/ch_style">7. Programming Policies and Guidelines</a>
</li>
</ul>
</li>
<li class="half_rhythm">
<a href="/book/pages/part3">Part 3. C++ Toolkit Library Reference</a>
<a href="/cxx-toolkit/pages/part3">Part 3. C++ Toolkit Library Reference</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/ch_core">8. Portability, Core Functionality and Application Framework</a>
<a href="/cxx-toolkit/pages/ch_core">8. Portability, Core Functionality and Application Framework</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_conn">9. Networking and IPC</a>
<a href="/cxx-toolkit/pages/ch_conn">9. Networking and IPC</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_dbapi">10. Database Access Support</a>
<a href="/cxx-toolkit/pages/ch_dbapi">10. Database Access Support</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_cgi">11. CGI and Fast-CGI </a>
<a href="/cxx-toolkit/pages/ch_cgi">11. CGI and Fast-CGI </a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_html">12. HTML</a>
<a href="/cxx-toolkit/pages/ch_html">12. HTML</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_ser">13. Data Serialization (ASN.1, XML)</a>
<a href="/cxx-toolkit/pages/ch_ser">13. Data Serialization (ASN.1, XML)</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_datamod">14. Biological Sequence Data Model</a>
<a href="/cxx-toolkit/pages/ch_datamod">14. Biological Sequence Data Model</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_objmgr">15. Biological Object Manager</a>
<a href="/cxx-toolkit/pages/ch_objmgr">15. Biological Object Manager</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_blast">16. BLAST API</a>
<a href="/cxx-toolkit/pages/ch_blast">16. BLAST API</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_dataaccess">17. Access to NCBI data</a>
<a href="/cxx-toolkit/pages/ch_dataaccess">17. Access to NCBI data</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_algoalign">18. Biological Sequence Alignment</a>
<a href="/cxx-toolkit/pages/ch_algoalign">18. Biological Sequence Alignment</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_gui">19. GUI and Graphics</a>
<a href="/cxx-toolkit/pages/ch_gui">19. GUI and Graphics</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_boost">20. Using the Boost Unit Test Framework</a>
<a href="/cxx-toolkit/pages/ch_boost">20. Using the Boost Unit Test Framework</a>
</li>
</ul>
</li>
<li class="half_rhythm">
<a href="/book/pages/part4">Part 4. Wrappers for 3rd-Party Packages</a>
<a href="/cxx-toolkit/pages/part4">Part 4. Wrappers for 3rd-Party Packages</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/ch_xmlwrapp">21. XmlWrapp (XML parsing and handling, XSLT, XPath)</a>
<a href="/cxx-toolkit/pages/ch_xmlwrapp">21. XmlWrapp (XML parsing and handling, XSLT, XPath)</a>
</li>
</ul>
</li>
<li class="half_rhythm">
<a href="/book/pages/part5">Part 5. Software</a>
<a href="/cxx-toolkit/pages/part5">Part 5. Software</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/ch_debug">22. Debugging, Exceptions, and Error Handling</a>
<a href="/cxx-toolkit/pages/ch_debug">22. Debugging, Exceptions, and Error Handling</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_grid">23. Distributed Computing</a>
<a href="/cxx-toolkit/pages/ch_grid">23. Distributed Computing</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_app">24. Applications</a>
<a href="/cxx-toolkit/pages/ch_app">24. Applications</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_demo">25. Examples and Demos</a>
<a href="/cxx-toolkit/pages/ch_demo">25. Examples and Demos</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_res">26. C Toolkit Resources for C++ Toolkit Users</a>
<a href="/cxx-toolkit/pages/ch_res">26. C Toolkit Resources for C++ Toolkit Users</a>
</li>
</ul>
</li>
<li class="half_rhythm">
<a href="/book/pages/part6">Part 6. Help and Support</a>
<a href="/cxx-toolkit/pages/part6">Part 6. Help and Support</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/ch_browse">27. NCBI C++ Toolkit Source Browser</a>
<a href="/cxx-toolkit/pages/ch_browse">27. NCBI C++ Toolkit Source Browser</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_devtools">28. Software Development Tools</a>
<a href="/cxx-toolkit/pages/ch_devtools">28. Software Development Tools</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/ch_faq">29. FAQs, Useful Documentation Links, and Mailing Lists</a>
<a href="/cxx-toolkit/pages/ch_faq">29. FAQs, Useful Documentation Links, and Mailing Lists</a>
</li>
</ul>
</li>
<li class="half_rhythm">
<a href="/book/pages/part7">Part 7. Library and Applications Configuration</a>
<a href="/cxx-toolkit/pages/part7">Part 7. Library and Applications Configuration</a>
<ul class="simple-list">
<li class="half_rhythm">
<a href="/book/pages/ch_libconfig">30. Library Configuration</a>
<a href="/cxx-toolkit/pages/ch_libconfig">30. Library Configuration</a>
</li>
</ul>
</li>
<li class="half_rhythm">
<a href="/book/pages/part8">Release Notes</a>
<a href="/cxx-toolkit/pages/part8">Release Notes</a>
</li>
<li class="half_rhythm">
<a href="/book/pages/appendix">Appendix - Books and Styles</a>
<a href="/cxx-toolkit/pages/appendix">Appendix - Books and Styles</a>
</li>
</ul>
</div>
<div>
<a style="float:right; padding-right: 50px;" href="https://github.com/toolkitbook/book/edit/gh-pages/{{ page.path }}"><img alt="Edit this page" src="/book/static/img/button_edit_grey.gif"></a>
<a style="float:right; padding-right: 50px;" target="_blank" href="/book/help_page">How to edit the page</a></div>
<a style="float:right; padding-right: 50px;" href="https://github.com/ncbi/cxx-toolkit/edit/gh-pages/{{ page.path }}"><img alt="Edit this page" src="/cxx-toolkit/static/img/button_edit_grey.gif"></a>
<a style="float:right; padding-right: 50px;" target="_blank" href="/cxx-toolkit/help_page">How to edit the page</a></div>
</div>

8 changes: 4 additions & 4 deletions _includes/sidebar.html
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<div class="portlet_content">
<ul>
<li class="external-only">
<a href="/book/pages/ch_getcode_svn#read-only-access-to-the-source-code-via-subversion">Documentation</a>
<a href="/cxx-toolkit/pages/ch_getcode_svn#read-only-access-to-the-source-code-via-subversion">Documentation</a>
</li>
<li class="external-only">
<a href="http://www.ncbi.nlm.nih.gov/viewvc/v1/trunk/c++/" ref="pagearea=source-application&amp;targetsite=external&amp;targetcat=link&amp;targettype=uri">Web (dev)</a>
Expand All @@ -83,16 +83,16 @@
<a href="http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/public_releases/RN_index.html">Release Notes</a>
</li>
<li>
<a href="/book/pages/ch_getcode_svn#public-access-to-the-source-code-via-ftp">Download the Toolkit</a>
<a href="/cxx-toolkit/pages/ch_getcode_svn#public-access-to-the-source-code-via-ftp">Download the Toolkit</a>
</li>
<li>
<a href="http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/book/pdf/TOC.pdf">PDF of the book</a>
</li>
<li>
<a href="/book/pages/ch_style">Coding Style</a>
<a href="/cxx-toolkit/pages/ch_style">Coding Style</a>
</li>
<li>
<a href="/book/pages/ch_faq#mailing-lists">Mailing Lists</a>
<a href="/cxx-toolkit/pages/ch_faq#mailing-lists">Mailing Lists</a>
</li>
<li>
<a href="mailto:[email protected]" ref="pagearea=source-application&amp;targetsite=external&amp;targetcat=link&amp;targettype=uri">
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20 changes: 10 additions & 10 deletions _layouts/default.html
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<title>NCBI C++ Toolkit Book</title>

<!-- external_resources begin -->
<script type="text/javascript" src="/book/default_files/jig.js"></script>
<link rel="stylesheet" type="text/css" href="/book/default_files/jig.css">
<script type="text/javascript" src="/book/default_files/jquery.js"></script>
<link type="text/css" rel="stylesheet" href="/book/default_files/jquery.css">
<script type="text/javascript" src="/cxx-toolkit/default_files/jig.js"></script>
<link rel="stylesheet" type="text/css" href="/cxx-toolkit/default_files/jig.css">
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<link type="text/css" rel="stylesheet" href="/cxx-toolkit/default_files/jquery.css">

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<meta name="description" content="A comprehensive manual on the NCBI C++ toolkit, including its design and development framework, a C++ library reference, software examples and demos, FAQs and release notes.">
<meta name="ncbipopper" content="triggerPosition:'bottom left',destPosition:'top left',openEvent:'click',closeEvent:'click'">

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<link xmlns="http://www.w3.org/1999/xhtml" type="text/css" rel="stylesheet" href="/cxx-toolkit/default_files/3579733.css" xml:base="http://127.0.0.1/sites/static/header_footer">
<link xmlns="http://www.w3.org/1999/xhtml" type="text/css" rel="stylesheet" href="/cxx-toolkit/default_files/3529739.css" media="print" xml:base="http://127.0.0.1/sites/static/header_footer">

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<link type="text/css" rel="stylesheet" href="/cxx-toolkit/default_files/3529739_002.css" media="print">

</head>

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<span class="pagefixtures"></span>


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2 changes: 1 addition & 1 deletion default_files/4025445.js
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Expand Up @@ -559,7 +559,7 @@ function SymbolSearch(bookID)
if(sel=='pLXR') { url = "http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/lxr/ident?i=" + f.__symbol.value + "&d="; } else
if(sel=='pLib') { url = "http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/lib_search/libsearch.cgi?public=yes&symbol=" + f.__symbol.value; } else
if(sel=='toolkit') { url = "http://www.ncbi.nlm.nih.gov/toolkit/?term=" + f.__symbol.value; } else
if(sel=='google_search') { url = "http://www.google.com/#q=" + f.__symbol.value + " site:toolkitbook.github.io"; }
if(sel=='google_search') { url = "http://www.google.com/#q=" + f.__symbol.value + " site:ncbi.github.io"; }

// window.location = url;
window.open(url,'_newtab');
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