Another update for blaEC core -> plus

ncbi · Nov 5, 2020 · d5ef00f · d5ef00f
1 parent 48d1b35
commit d5ef00f
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/test_both.expected b/test_both.expected
@@ -3,7 +3,7 @@ blaTEM-156	contig01	101	961	+	blaTEM-156	class A beta-lactamase TEM-156	core	AMR
 blaPDC-114_blast	contig02	1	1191	+	blaPDC	PDC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	397	397	100.00	99.75	397	WP_061189306.1	class C beta-lactamase PDC-114	NF000422.6	PDC family class C beta-lactamase
 blaOXA-436_partial	contig03	101	802	+	blaOXA	OXA-48 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	233	265	87.92	100.00	233	WP_058842180.1	OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-436	NF012161.0	class D beta-lactamase
 vanG	contig04	101	1147	+	vanG	D-alanine--D-serine ligase VanG	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	349	349	100.00	100.00	349	WP_063856695.1	D-alanine--D-serine ligase VanG	NF000091.3	D-alanine--D-serine ligase VanG
-NA	contig04	1261	2391	+	blaEC	BlaEC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTX	377	377	100.00	98.14	377	WP_063610930.1	class C extended-spectrum beta-lactamase EC-15	NA	NA
+NA	contig04	1261	2391	+	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTX	377	377	100.00	98.14	377	WP_063610930.1	class C extended-spectrum beta-lactamase EC-15	NA	NA
 NA	contig08	101	700	+	blaTEM	TEM family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIAL_CONTIG_ENDX	200	286	69.93	100.00	200	WP_061158039.1	class A beta-lactamase TEM-156	NA	NA
 aph3pp-Ib_partial_5p_neg	contig09	1	675	-	aph(3'')-Ib	aminoglycoside O-phosphotransferase APH(3'')-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIAL_CONTIG_ENDP	225	275	81.82	100.00	225	WP_109545041.1	aminoglycoside O-phosphotransferase APH(3'')-Ib	NF032896.1	APH(3'') family aminoglycoside O-phosphotransferase
 sul2_partial_3p_neg	contig09	715	1377	-	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	PARTIAL_CONTIG_ENDP	221	271	81.55	100.00	221	WP_001043265.1	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA