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Update the test data for version 4.0.15
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evolarjun committed Jan 14, 2025
1 parent 8c72057 commit 0e2291c
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Showing 2 changed files with 2 additions and 2 deletions.
2 changes: 1 addition & 1 deletion test_both.expected
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,6 @@ NA contig16 1 720 + nfsA_K141STOP Escherichia nitrofurantoin resistant NfsA core
NA contig16 1 720 + nfsA_R15C Escherichia nitrofurantoin resistant NfsA core AMR POINT NITROFURAN NITROFURANTOIN POINTX 240 240 100.00 99.17 240 WP_089631889.1 nitroreductase NfsA NA NA nfsA
NA contig17 1 247 + ampC_T-14TGT Escherichia cephalosporin resistant ampC core AMR POINT BETA-LACTAM CEPHALOSPORIN POINTN 247 245 100.00 99.19 247 NZ_CP041538.1:1149245-1149489 ampC/blaEC promoter region NA NA NA
stxA2a_prot contig18 279 1238 + stxA2 Shiga toxin Stx2 subunit A plus VIRULENCE VIRULENCE STX2 stxA2 EXACTP 319 319 100.00 100.00 319 TJA36680.1 Shiga toxin Stx2 subunit A NF041702.1 Shiga toxin Stx2 subunit A stxA2_acd
NA contig18 279 1519 + stx2a_operon stx2a operon plus VIRULENCE STX_TYPE STX2 STX2A COMPLETE 1241 100.00 410 AAS07600.1, AAM90978.1 Shiga toxin stx2a NA NA stxA2a::stxB2a
NA contig18 279 1519 + stx2a_operon stx2a operon plus VIRULENCE STX_TYPE STX2 STX2A COMPLETE 1241 NA NA 100.00 410 AAS07600.1,AAM90978.1 Shiga toxin stx2a NA NA stxA2a::stxB2a
stxB2a_prot contig18 1250 1519 + stxB2 Shiga toxin Stx2a subunit B plus VIRULENCE VIRULENCE STX2 stxB2a EXACTP 89 89 100.00 100.00 89 AAM90978.1 Shiga toxin Stx2a subunit B NF033660.0 Shiga toxin Stx2 subunit B stxB2a
nimIJ_hmm contigX 1 501 + nimIJ NimIJ family 5-nitroimidazole reductase core AMR AMR NITROIMIDAZOLE NITROIMIDAZOLE HMM 166 165 98.18 76.54 162 WP_005812825.1 NimIJ family 5-nitroimidazole reductase NF000262.1 NimIJ family 5-nitroimidazole reductase nimIJ
2 changes: 1 addition & 1 deletion test_dna.expected
Original file line number Diff line number Diff line change
Expand Up @@ -21,5 +21,5 @@ NA contig16 1 720 + nfsA_K141STOP Escherichia nitrofurantoin resistant NfsA core
NA contig16 1 720 + nfsA_R15C Escherichia nitrofurantoin resistant NfsA core AMR POINT NITROFURAN NITROFURANTOIN POINTX 240 240 100.00 99.17 240 WP_089631889.1 nitroreductase NfsA NA NA nfsA
NA contig17 1 247 + ampC_T-14TGT Escherichia cephalosporin resistant ampC core AMR POINT BETA-LACTAM CEPHALOSPORIN POINTN 247 245 100.00 99.19 247 NZ_CP041538.1:1149245-1149489 ampC/blaEC promoter region NA NA NA
NA contig18 279 1235 + stxA2 Shiga toxin Stx2 subunit A plus VIRULENCE VIRULENCE STX2 stxA2 EXACTX 319 319 100.00 100.00 319 TJA36680.1 Shiga toxin Stx2 subunit A NA NA stxA2_acd
NA contig18 279 1519 + stx2a_operon stx2a operon plus VIRULENCE STX_TYPE STX2 STX2A COMPLETE 1241 100.00 410 AAS07600.1, AAM90978.1 Shiga toxin stx2a NA NA stxA2a::stxB2a
NA contig18 279 1519 + stx2a_operon stx2a operon plus VIRULENCE STX_TYPE STX2 STX2A COMPLETE 1241 NA NA 100.00 410 AAS07600.1,AAM90978.1 Shiga toxin stx2a NA NA stxA2a::stxB2a
NA contig18 1250 1516 + stxB2 Shiga toxin Stx2a subunit B plus VIRULENCE VIRULENCE STX2 stxB2a EXACTX 89 89 100.00 100.00 89 AAM90978.1 Shiga toxin Stx2a subunit B NA NA stxB2a

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