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feat(catalogue): add attributes for valid dcat #4692

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6 changes: 6 additions & 0 deletions data/_models/shared/Collection events.csv
Original file line number Diff line number Diff line change
Expand Up @@ -14,3 +14,9 @@ Collection events,,sample categories,ontology_array,,,CatalogueOntologies,Sample
Collection events,,standardized tools,ontology_array,,,CatalogueOntologies,Standardized tools,,,,,"Standardized tools, e.g. surveys, questionnaires, instruments used to collect data for this collection event","DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,StudiesStaging,UMCUCohorts,INTEGRATE",
Collection events,,standardized tools other,,,,,,,,,,"If 'other', please specify","DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,StudiesStaging,UMCUCohorts,INTEGRATE",
Collection events,,core variables,string_array,,,,,,,,,Name 10-20 relevant variables that were collected in this collection event,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,StudiesStaging,UMCUCohorts,INTEGRATE",
Collection events,,contact point,ref,,,,Contacts,,,,http://www.w3.org/ns/dcat#contactPoint,This attribute is written during migration of data from staging areas and used to produce valid dcat output. Contact point for this resource,DataCatalogueFlat,
Collection events,,publisher,ref,,,,Organisations,,,,http://purl.org/dc/terms/publisher,This attribute is written during migration of data from staging areas and used to produce valid dcat output. Organisation that published this resource,DataCatalogueFlat,
Collection events,,creator,ref_array,,,,Organisations,,,,http://purl.org/dc/terms/creator,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. Organisation(s) that created this resource,DataCatalogueFlat,
Collection events,,license,hyperlink,,,,,,,,http://purl.org/dc/terms/license,A legal document under which this catalogue record is made available,"DataCatalogueFlat,CohortsStaging,RWEStaging,NetworksStaging,StudiesStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE",
Collection events,,issued,datetime,,,,,,,,http://purl.org/dc/terms/issued,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. When the metadata for this resource was first published in the catalogue,DataCatalogueFlat,
Collection events,,modified,datetime,,,,,,,,http://purl.org/dc/terms/modified,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. When the metadata for this resource was last modified,DataCatalogueFlat,
9 changes: 7 additions & 2 deletions data/_models/shared/Resources.csv
Original file line number Diff line number Diff line change
Expand Up @@ -24,6 +24,8 @@ Resources,,contact email,,,,,,,,,,Contact e-mail address ,"DataCatalogueFlat,Coh
Resources,,logo,file,,,,,,,,,"Logo of the resource, for use on homepages etc.","DataCatalogueFlat,CohortsStaging,RWEStaging,NetworksStaging,StudiesStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Resources,,status,ontology,,,CatalogueOntologies,Study status,,,,,Status of the study,"DataCatalogueFlat,EMA,StudiesStaging"
Resources,,license,hyperlink,,,,,,,,http://purl.org/dc/terms/license,A legal document under which this catalogue record is made available,"DataCatalogueFlat,CohortsStaging,RWEStaging,NetworksStaging,StudiesStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Resources,,issued,datetime,,,,,,,,http://purl.org/dc/terms/issued,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. When th metadata for this resource was first published in the catalogue,DataCatalogueFlat
Resources,,modified,datetime,,,,,,,,http://purl.org/dc/terms/modified,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. When the metadata for this resource was last modified,DataCatalogueFlat
Resources,,design and structure,heading,,,,,,,,,Structure of the resource,"DataCatalogueFlat,EMA,CohortsStaging,RWEStaging,NetworksStaging,StudiesStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Resources,,design,ontology,,,CatalogueOntologies,Cohort designs,,,,,"The study design of this cohort, i.e. cross-sectional or longitudinal","DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Resources,,design description,text,,,,,,,,,"Short description of the study design of this resource, if applicable","DataCatalogueFlat,EMA,RWEStaging,CohortsStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Expand Down Expand Up @@ -63,8 +65,11 @@ Resources,,population coverage,text,,,,,,,,,Estimated percentage of the populati
Resources,,population not covered,text,,,,,,,,,"Description of the population covered by the data source in the catchment area whose data are not collected, where applicable (e.g. people who are registered only for private care) ","DataCatalogueFlat,EMA,RWEStaging"
Resources,,counts,refback,,,,Resource counts,,resource,,,Counts of e.g. samples defined for this resource,"DataCatalogueFlat,RWEStaging,StudiesStaging,INTEGRATE"
Resources,,contributors,heading,,,,,,,,,List of relevant collaborations,"DataCatalogueFlat,EMA,CohortsStaging,RWEStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Resources,,people involved,refback,,,,Contacts,,resource,,http://www.w3.org/ns/dcat#contactPoint,Persons involved and their role(s),"DataCatalogueFlat,EMA,CohortsStaging,RWEStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Resources,,organisations involved,refback,,,,Organisations,,resource,,"http://purl.org/dc/terms/publisher,http://purl.org/dc/terms/creator",Organisations involved and their role(s),"DataCatalogueFlat,EMA,CohortsStaging,RWEStaging,UMCGCohortsStaging,NetworksStaging,UMCUCohorts,INTEGRATE"
Resources,,people involved,refback,,,,Contacts,,resource,,,Persons involved and their role(s),"DataCatalogueFlat,EMA,CohortsStaging,RWEStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE"
Resources,,contact point,ref,,,,Contacts,,,,http://www.w3.org/ns/dcat#contactPoint,This attribute is written during migration of data from staging areas and used to produce valid dcat output. Contact point for this resource,DataCatalogueFlat
Resources,,organisations involved,refback,,,,Organisations,,resource,,,Organisations involved and their role(s),"DataCatalogueFlat,EMA,CohortsStaging,RWEStaging,UMCGCohortsStaging,NetworksStaging,UMCUCohorts,INTEGRATE"
Resources,,publisher,ref,,,,Organisations,,,,http://purl.org/dc/terms/publisher,This attribute is written during migration of data from staging areas and used to produce valid dcat output. Organisation that published this resource,DataCatalogueFlat
Resources,,creator,ref_array,,,,Organisations,,,,http://purl.org/dc/terms/creator,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. Organisation(s) that created this resource,DataCatalogueFlat
Resources,,networks involved,refback,,,,Resources,,resources,,,The consortia or networks that this resource is part of,"DataCatalogueFlat,EMA"
Resources,,networks other,text,,,,,,,,,List the names of any other networks that are not listed and this resource is involved in,EMA
Resources,,available data and samples,heading,,,,,,,,,Data model and contents,"DataCatalogueFlat,EMA,RWEStaging,CohortsStaging"
Expand Down
8 changes: 7 additions & 1 deletion data/_models/shared/Subpopulations.csv
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
tableName,tableExtends,columnName,columnType,key,required,refSchema,refTable,refLink,refBack,validation,semantics,description,profiles,visible
Subpopulations,,,,,,,,,,,http://www.w3.org/ns/dcat#Dataset,Subpopulations defined for this resource,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,NetworksStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,resource,ref,1,TRUE,,Resources,,,,http://www.w3.org/ns/dcat#inSeries,Resource this subpopulation is part of,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,NetworksStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,name,,1,TRUE,,,,,,http://purl.org/dc/terms/title,"Subpopulation name, e.g. 'mothers in first trimester','newborns'","DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,NetworksStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,name,,1,TRUE,,,,,,"http://purl.org/dc/terms/title,http://purl.org/dc/terms/identifier","Subpopulation name, e.g. 'mothers in first trimester','newborns'","DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,NetworksStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,description,text,,,,,,,,http://purl.org/dc/terms/description,Subpopulation description,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,NetworksStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,number of participants,int,,,,,,,,,Number of participants in this subpopulation,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,counts,refback,,,,Subpopulation counts,,subpopulation,,,"Total number of unique individuals per age(group), gender and year","DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,UMCUCohorts",
Expand All @@ -16,3 +16,9 @@ Subpopulations,,inclusion criteria,ontology_array,,,CatalogueOntologies,Inclusio
Subpopulations,,other inclusion criteria,text,,,,,,,,,Other inclusion criteria applied to this subpopulation,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,exclusion criteria,ontology_array,,,CatalogueOntologies,Inclusion Exclusion Criteria,,,,,Exclusion criteria applied to this subpopulation,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,other exclusion criteria,text,,,,,,,,,Other exclusion criteria applied to this subpopulation,"DataCatalogueFlat,CohortsStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,contact point,ref,,,,Contacts,,,,http://www.w3.org/ns/dcat#contactPoint,This attribute is written during migration of data from staging areas and used to produce valid dcat output. Contact point for this resource,DataCatalogueFlat,
Subpopulations,,publisher,ref,,,,Organisations,,,,http://purl.org/dc/terms/publisher,This attribute is written during migration of data from staging areas and used to produce valid dcat output. Organisation that published this resource,DataCatalogueFlat,
Subpopulations,,creator,ref_array,,,,Organisations,,,,http://purl.org/dc/terms/creator,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. Organisation(s) that created this resource,DataCatalogueFlat,
Subpopulations,,license,hyperlink,,,,,,,,http://purl.org/dc/terms/license,A legal document under which this catalogue record is made available,"DataCatalogueFlat,CohortsStaging,RWEStaging,NetworksStaging,StudiesStaging,UMCGCohortsStaging,UMCUCohorts,INTEGRATE",
Subpopulations,,issued,datetime,,,,,,,,http://purl.org/dc/terms/issued,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. When the metadata for this resource was first published in the catalogue,DataCatalogueFlat,
Subpopulations,,modified,datetime,,,,,,,,http://purl.org/dc/terms/modified,This attribute is read only and written during migration of data from staging areas and used to produce valid dcat output. When the metadata for this resource was last modified,DataCatalogueFlat,