Copper in ccRCC

Copper drives remodeling of metabolic state and progression of clear cell renal cell carcinoma (paper link)

Download repository

• git clone https://github.com/mjarek66git/ccRCC.git

Analysis instructions

• To reproduce single cell RNA-seq analysis, go to "scRNA_seq_analysis" directory
• To reproduce analysis in Figure 7F, go to "Figure7F" directories
• 786-O low and high copper treatments RNA-seq data are stored in: GSE250028 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250028)
• To reproduce spatial analysis, go to "spatialRNA_seq_analysis" directory