HSC-248: HSC reports

configs/openmrs/initializer_config/personattributetypes/personAttributeTypes.csv

@@ -12,4 +12,4 @@ d7a52bd1-77dd-4f71-a5d0-92848a746014,,impl.contactPersonName,Contact Person's Na
 62844ea0-8be6-4a12-9471-cbb1f060d78b,,impl.contactPersonPhoneNumber,Contact Person's Phone Number,Numéro de la personne à contacter,Numéro de la personne à contacter,java.lang.String,,,,
 0c6d3b0c-7b54-4848-9638-6afc046c59ec,,impl.contactPersonAddress,Contact Person's Address,Adresse de la personne à contacter,Adresse de la personne à contacter,java.lang.String,,,,
 b47a9c55-4d28-4549-a223-b16d54b8fbbf,,impl.contactPersonRelationship,Contact Person  Relationship,Lien avec la personne à contacter,Lien avec la personne à contacter,org.openmrs.Concept,ee63d1f2-095a-4d28-ba95-fbc933666070,,,
-d9b2d63d-6b6d-4c9e-b4e1-6e8f4f3efc3e,,email,Email,Email,Email,java.lang.String,d9b2d63d-6b6d-4c9e-b4e1-6e8f4f3efc3e,TRUE,,
+d9b2d63d-6b6d-4c9e-b4e1-6e8f4f3efc3e,,email,Email,Email,Email,java.lang.String,d9b2d63d-6b6d-4c9e-b4e1-6e8f4f3efc3e,TRUE,,

configs/superset/assembly.xml

@@ -0,0 +1,20 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<assembly
+        xmlns="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.2"
+        xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+        xsi:schemaLocation="
+    http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.2
+      http://maven.apache.org/xsd/assembly-1.1.2.xsd"
+>
+    <id>zip-superset-configs</id>
+    <formats>
+        <format>zip</format>
+    </formats>
+    <includeBaseDirectory>false</includeBaseDirectory>
+    <fileSets>
+        <fileSet>
+            <outputDirectory>.</outputDirectory>
+            <directory>${project.build.directory}/${project.artifactId}-${project.version}</directory>
+        </fileSet>
+    </fileSets>
+</assembly>

configs/superset/assets/charts/Age_distribution_of_non-pregnant_women_receiving_iron_folate_ferus_sulfate__folic_acid_8.yaml

@@ -0,0 +1,78 @@
+slice_name: Age distribution of non-pregnant women receiving iron folate (ferus sulfate
+  + folic acid)
+description: null
+certified_by: null
+certification_details: null
+viz_type: echarts_area
+params:
+  datasource: 4__table
+  viz_type: echarts_area
+  slice_id: 8
+  x_axis: age
+  time_grain_sqla: P1D
+  x_axis_sort_asc: true
+  x_axis_sort_series: name
+  x_axis_sort_series_ascending: true
+  metrics:
+  - count
+  groupby: []
+  adhoc_filters:
+  - expressionType: SIMPLE
+    subject: date_started
+    operator: TEMPORAL_RANGE
+    operatorId: TEMPORAL_RANGE
+    comparator: No filter
+    clause: WHERE
+    sqlExpression: null
+    isExtra: false
+    isNew: false
+    datasourceWarning: false
+    filterOptionName: filter_p5ku6b2g3g_bad8jyydmn
+  order_desc: true
+  row_limit: 10000
+  truncate_metric: true
+  show_empty_columns: true
+  comparison_type: values
+  annotation_layers: []
+  forecastPeriods: 10
+  forecastInterval: 0.8
+  x_axis_title: Age (years)
+  x_axis_title_margin: 30
+  y_axis_title: Number of other women receiving iron folate
+  y_axis_title_margin: 50
+  y_axis_title_position: Left
+  sort_series_type: sum
+  color_scheme: supersetColors
+  seriesType: line
+  opacity: 0.4
+  show_value: false
+  stack: Stack
+  only_total: true
+  percentage_threshold: 0
+  show_extra_controls: true
+  markerEnabled: true
+  markerSize: 5
+  minorTicks: true
+  show_legend: true
+  legendType: scroll
+  legendOrientation: top
+  x_axis_time_format: smart_date
+  rich_tooltip: true
+  tooltipTimeFormat: smart_date
+  y_axis_format: SMART_NUMBER
+  truncateXAxis: true
+  y_axis_bounds:
+  - null
+  - null
+  extra_form_data: {}
+  dashboards:
+  - 1
+query_context: '{"datasource":{"id":4,"type":"table"},"force":false,"queries":[{"filters":[{"col":"date_started","op":"TEMPORAL_RANGE","val":"No
+  filter"}],"extras":{"time_grain_sqla":"P1D","having":"","where":""},"applied_time_extras":{},"columns":[{"timeGrain":"P1D","columnType":"BASE_AXIS","sqlExpression":"age","label":"age","expressionType":"SQL"}],"metrics":["count"],"orderby":[["count",false]],"annotation_layers":[],"row_limit":10000,"series_columns":[],"series_limit":0,"order_desc":true,"url_params":{},"custom_params":{},"custom_form_data":{},"time_offsets":[],"post_processing":[{"operation":"pivot","options":{"index":["age"],"columns":[],"aggregates":{"count":{"operator":"mean"}},"drop_missing_columns":false}},{"operation":"flatten"}]}],"form_data":{"datasource":"4__table","viz_type":"echarts_area","slice_id":8,"x_axis":"age","time_grain_sqla":"P1D","x_axis_sort_asc":true,"x_axis_sort_series":"name","x_axis_sort_series_ascending":true,"metrics":["count"],"groupby":[],"adhoc_filters":[{"expressionType":"SIMPLE","subject":"date_started","operator":"TEMPORAL_RANGE","operatorId":"TEMPORAL_RANGE","comparator":"No
+  filter","clause":"WHERE","sqlExpression":null,"isExtra":false,"isNew":false,"datasourceWarning":false,"filterOptionName":"filter_p5ku6b2g3g_bad8jyydmn"}],"order_desc":true,"row_limit":10000,"truncate_metric":true,"show_empty_columns":true,"comparison_type":"values","annotation_layers":[],"forecastPeriods":10,"forecastInterval":0.8,"x_axis_title":"Age
+  (years)","x_axis_title_margin":30,"y_axis_title":"Number of other women receiving
+  iron folate","y_axis_title_margin":50,"y_axis_title_position":"Left","sort_series_type":"sum","color_scheme":"supersetColors","seriesType":"line","opacity":0.4,"show_value":false,"stack":"Stack","only_total":true,"percentage_threshold":0,"show_extra_controls":true,"markerEnabled":true,"markerSize":5,"minorTicks":true,"show_legend":true,"legendType":"scroll","legendOrientation":"top","x_axis_time_format":"smart_date","rich_tooltip":true,"tooltipTimeFormat":"smart_date","y_axis_format":"SMART_NUMBER","truncateXAxis":true,"y_axis_bounds":[null,null],"extra_form_data":{},"dashboards":[1],"force":false,"result_format":"json","result_type":"full"},"result_format":"json","result_type":"full"}'
+cache_timeout: null
+uuid: 4328ca2c-8f53-49a1-a7be-a4968c7ff678
+version: 1.0.0
+dataset_uuid: 7232c62b-55a1-48c1-a13f-edba38253ec0

configs/superset/assets/charts/Age_distribution_of_patients_receiving_albendazole_3.yaml

@@ -0,0 +1,83 @@
+slice_name: Age distribution of patients receiving albendazole
+description: null
+certified_by: null
+certification_details: null
+viz_type: echarts_timeseries_bar
+params:
+  datasource: 1__table
+  viz_type: echarts_timeseries_bar
+  slice_id: 3
+  x_axis: age
+  time_grain_sqla: P1D
+  x_axis_sort_asc: true
+  x_axis_sort_series: name
+  x_axis_sort_series_ascending: true
+  metrics:
+  - count
+  groupby:
+  - gender
+  adhoc_filters:
+  - clause: WHERE
+    comparator: No filter
+    datasourceWarning: false
+    expressionType: SIMPLE
+    filterOptionName: filter_ualiyetyj7f_rnimf1j8c1o
+    isExtra: false
+    isNew: false
+    operator: TEMPORAL_RANGE
+    operatorId: TEMPORAL_RANGE
+    sqlExpression: null
+    subject: date_created
+  order_desc: true
+  row_limit: 10000
+  truncate_metric: true
+  show_empty_columns: true
+  comparison_type: values
+  annotation_layers: []
+  forecastPeriods: 10
+  forecastInterval: 0.8
+  orientation: vertical
+  x_axis_title: Age
+  x_axis_title_margin: 30
+  y_axis_title: Number of patients receiving Albendazole
+  y_axis_title_margin: 50
+  y_axis_title_position: Left
+  sort_series_type: sum
+  sort_series_ascending: false
+  color_scheme: supersetColors
+  show_value: true
+  stack: Stack
+  only_total: true
+  minorTicks: true
+  zoomable: false
+  show_legend: false
+  legendType: scroll
+  legendOrientation: top
+  legendMargin: null
+  x_axis_time_format: smart_date
+  xAxisLabelRotation: 0
+  y_axis_format: SMART_NUMBER
+  logAxis: false
+  minorSplitLine: true
+  truncateXAxis: true
+  xAxisBounds:
+  - null
+  - null
+  truncateYAxis: false
+  y_axis_bounds:
+  - null
+  - null
+  rich_tooltip: true
+  tooltipSortByMetric: true
+  tooltipTimeFormat: smart_date
+  extra_form_data: {}
+  dashboards:
+  - 3
+query_context: '{"datasource":{"id":1,"type":"table"},"force":false,"queries":[{"filters":[{"col":"date_created","op":"TEMPORAL_RANGE","val":"No
+  filter"}],"extras":{"time_grain_sqla":"P1D","having":"","where":""},"applied_time_extras":{},"columns":[{"timeGrain":"P1D","columnType":"BASE_AXIS","sqlExpression":"age","label":"age","expressionType":"SQL"},"gender"],"metrics":["count"],"orderby":[["count",false]],"annotation_layers":[],"row_limit":10000,"series_columns":["gender"],"series_limit":0,"order_desc":true,"url_params":{},"custom_params":{},"custom_form_data":{},"time_offsets":[],"post_processing":[{"operation":"pivot","options":{"index":["age"],"columns":["gender"],"aggregates":{"count":{"operator":"mean"}},"drop_missing_columns":false}},{"operation":"rename","options":{"columns":{"count":null},"level":0,"inplace":true}},{"operation":"flatten"}]}],"form_data":{"datasource":"1__table","viz_type":"echarts_timeseries_bar","slice_id":3,"x_axis":"age","time_grain_sqla":"P1D","x_axis_sort_asc":true,"x_axis_sort_series":"name","x_axis_sort_series_ascending":true,"metrics":["count"],"groupby":["gender"],"adhoc_filters":[{"clause":"WHERE","comparator":"No
+  filter","datasourceWarning":false,"expressionType":"SIMPLE","filterOptionName":"filter_ualiyetyj7f_rnimf1j8c1o","isExtra":false,"isNew":false,"operator":"TEMPORAL_RANGE","operatorId":"TEMPORAL_RANGE","sqlExpression":null,"subject":"date_created"}],"order_desc":true,"row_limit":10000,"truncate_metric":true,"show_empty_columns":true,"comparison_type":"values","annotation_layers":[],"forecastPeriods":10,"forecastInterval":0.8,"orientation":"vertical","x_axis_title":"Age","x_axis_title_margin":30,"y_axis_title":"Number
+  of patients receiving Albendazole","y_axis_title_margin":50,"y_axis_title_position":"Left","sort_series_type":"sum","sort_series_ascending":false,"color_scheme":"supersetColors","show_value":true,"stack":"Stack","only_total":true,"minorTicks":true,"zoomable":false,"show_legend":false,"legendType":"scroll","legendOrientation":"top","legendMargin":null,"x_axis_time_format":"smart_date","xAxisLabelRotation":0,"y_axis_format":"SMART_NUMBER","logAxis":false,"minorSplitLine":true,"truncateXAxis":true,"xAxisBounds":[null,null],"truncateYAxis":false,"y_axis_bounds":[null,null],"rich_tooltip":true,"tooltipSortByMetric":true,"tooltipTimeFormat":"smart_date","extra_form_data":{},"dashboards":[3],"force":false,"result_format":"json","result_type":"full"},"result_format":"json","result_type":"full"}'
+cache_timeout: null
+uuid: 77d1228c-2f30-4ea3-af5c-569addc79c26
+version: 1.0.0
+dataset_uuid: 112cd19a-9a3a-45a5-95cb-e1f1b198eece

configs/superset/assets/charts/Age_distribution_of_pregnant_women_receiving_iron_folate_ferus_sulfate__folic_acid_11.yaml

@@ -0,0 +1,77 @@
+slice_name: Age distribution of pregnant women receiving iron folate (ferus sulfate
+  + folic acid)
+description: null
+certified_by: null
+certification_details: null
+viz_type: echarts_area
+params:
+  datasource: 3__table
+  viz_type: echarts_area
+  x_axis: age
+  time_grain_sqla: P1D
+  x_axis_sort_asc: true
+  x_axis_sort_series: name
+  x_axis_sort_series_ascending: true
+  metrics:
+  - count
+  groupby: []
+  adhoc_filters:
+  - expressionType: SIMPLE
+    subject: date_started
+    operator: TEMPORAL_RANGE
+    operatorId: TEMPORAL_RANGE
+    comparator: No filter
+    clause: WHERE
+    sqlExpression: null
+    isExtra: false
+    isNew: false
+    datasourceWarning: false
+    filterOptionName: filter_wix1gww18y_zfbn00lxymh
+  order_desc: true
+  row_limit: 10000
+  truncate_metric: true
+  show_empty_columns: true
+  comparison_type: values
+  annotation_layers: []
+  forecastPeriods: 10
+  forecastInterval: 0.8
+  x_axis_title: Age (years)
+  x_axis_title_margin: 30
+  y_axis_title: Number of pregnant women
+  y_axis_title_margin: 50
+  y_axis_title_position: Left
+  sort_series_type: sum
+  color_scheme: echarts5Colors
+  seriesType: line
+  opacity: 0.3
+  show_value: true
+  stack: Stack
+  only_total: true
+  show_extra_controls: true
+  markerEnabled: true
+  markerSize: 9
+  minorTicks: false
+  show_legend: true
+  legendType: scroll
+  legendOrientation: top
+  x_axis_time_format: smart_date
+  rich_tooltip: true
+  tooltipSortByMetric: true
+  tooltipTimeFormat: smart_date
+  y_axis_format: ',d'
+  logAxis: false
+  minorSplitLine: true
+  truncateXAxis: true
+  y_axis_bounds:
+  - null
+  - null
+  extra_form_data: {}
+  dashboards: []
+query_context: '{"datasource":{"id":3,"type":"table"},"force":false,"queries":[{"filters":[{"col":"date_started","op":"TEMPORAL_RANGE","val":"No
+  filter"}],"extras":{"time_grain_sqla":"P1D","having":"","where":""},"applied_time_extras":{},"columns":[{"timeGrain":"P1D","columnType":"BASE_AXIS","sqlExpression":"age","label":"age","expressionType":"SQL"}],"metrics":["count"],"orderby":[["count",false]],"annotation_layers":[],"row_limit":10000,"series_columns":[],"series_limit":0,"order_desc":true,"url_params":{},"custom_params":{},"custom_form_data":{},"time_offsets":[],"post_processing":[{"operation":"pivot","options":{"index":["age"],"columns":[],"aggregates":{"count":{"operator":"mean"}},"drop_missing_columns":false}},{"operation":"flatten"}]}],"form_data":{"datasource":"3__table","viz_type":"echarts_area","x_axis":"age","time_grain_sqla":"P1D","x_axis_sort_asc":true,"x_axis_sort_series":"name","x_axis_sort_series_ascending":true,"metrics":["count"],"groupby":[],"adhoc_filters":[{"expressionType":"SIMPLE","subject":"date_started","operator":"TEMPORAL_RANGE","operatorId":"TEMPORAL_RANGE","comparator":"No
+  filter","clause":"WHERE","sqlExpression":null,"isExtra":false,"isNew":false,"datasourceWarning":false,"filterOptionName":"filter_wix1gww18y_zfbn00lxymh"}],"order_desc":true,"row_limit":10000,"truncate_metric":true,"show_empty_columns":true,"comparison_type":"values","annotation_layers":[],"forecastPeriods":10,"forecastInterval":0.8,"x_axis_title":"Age
+  (years)","x_axis_title_margin":30,"y_axis_title":"Number of pregnant women","y_axis_title_margin":50,"y_axis_title_position":"Left","sort_series_type":"sum","color_scheme":"echarts5Colors","seriesType":"line","opacity":0.3,"show_value":true,"stack":"Stack","only_total":true,"show_extra_controls":true,"markerEnabled":true,"markerSize":9,"minorTicks":false,"show_legend":true,"legendType":"scroll","legendOrientation":"top","x_axis_time_format":"smart_date","rich_tooltip":true,"tooltipSortByMetric":true,"tooltipTimeFormat":"smart_date","y_axis_format":",d","logAxis":false,"minorSplitLine":true,"truncateXAxis":true,"y_axis_bounds":[null,null],"extra_form_data":{},"dashboards":[],"force":false,"result_format":"json","result_type":"full"},"result_format":"json","result_type":"full"}'
+cache_timeout: null
+uuid: f3aaf511-e1ce-4b0a-bfc9-0275aef29da9
+version: 1.0.0
+dataset_uuid: 54e7e9a1-4295-4ead-9726-8aef532c85a5

configs/superset/assets/charts/Age_distribution_of_pregnant_women_receiving_prenatal_multivitamins_17.yaml

@@ -0,0 +1,76 @@
+slice_name: Age distribution of pregnant women receiving  prenatal multivitamins
+description: null
+certified_by: null
+certification_details: null
+viz_type: echarts_area
+params:
+  datasource: 6__table
+  viz_type: echarts_area
+  x_axis: patient_age_at_visit
+  time_grain_sqla: P1D
+  xAxisForceCategorical: true
+  x_axis_sort: patient_age_at_visit
+  x_axis_sort_asc: true
+  x_axis_sort_series: name
+  x_axis_sort_series_ascending: true
+  metrics:
+  - count
+  groupby: []
+  contributionMode: null
+  adhoc_filters:
+  - expressionType: SIMPLE
+    subject: date_started
+    operator: TEMPORAL_RANGE
+    operatorId: TEMPORAL_RANGE
+    comparator: No filter
+    clause: WHERE
+    sqlExpression: null
+    isExtra: false
+    isNew: false
+    datasourceWarning: false
+    filterOptionName: filter_idst49r1vfk_5skc8na4gsh
+  order_desc: true
+  row_limit: 10000
+  truncate_metric: true
+  show_empty_columns: false
+  comparison_type: values
+  annotation_layers: []
+  forecastPeriods: 10
+  forecastInterval: 0.8
+  x_axis_title: Age in years
+  x_axis_title_margin: 30
+  y_axis_title: Number of pregnant women
+  y_axis_title_margin: 50
+  y_axis_title_position: Left
+  sort_series_type: sum
+  color_scheme: supersetColors
+  seriesType: line
+  opacity: 0.2
+  show_value: false
+  only_total: true
+  markerSize: 6
+  minorTicks: true
+  zoomable: true
+  show_legend: true
+  legendType: scroll
+  legendOrientation: top
+  x_axis_time_format: smart_date
+  rich_tooltip: true
+  tooltipSortByMetric: true
+  tooltipTimeFormat: smart_date
+  y_axis_format: SMART_NUMBER
+  truncateXAxis: true
+  y_axis_bounds:
+  - null
+  - null
+  extra_form_data: {}
+  dashboards:
+  - 6
+query_context: '{"datasource":{"id":6,"type":"table"},"force":false,"queries":[{"filters":[{"col":"date_started","op":"TEMPORAL_RANGE","val":"No
+  filter"}],"extras":{"time_grain_sqla":"P1D","having":"","where":""},"applied_time_extras":{},"columns":[{"timeGrain":"P1D","columnType":"BASE_AXIS","sqlExpression":"patient_age_at_visit","label":"patient_age_at_visit","expressionType":"SQL"}],"metrics":["count"],"orderby":[["count",false]],"annotation_layers":[],"row_limit":10000,"series_columns":[],"series_limit":0,"order_desc":true,"url_params":{},"custom_params":{},"custom_form_data":{},"time_offsets":[],"post_processing":[{"operation":"pivot","options":{"index":["patient_age_at_visit"],"columns":[],"aggregates":{"count":{"operator":"mean"}},"drop_missing_columns":true}},{"operation":"sort","options":{"is_sort_index":true,"ascending":true}},{"operation":"flatten"}]}],"form_data":{"datasource":"6__table","viz_type":"echarts_area","x_axis":"patient_age_at_visit","time_grain_sqla":"P1D","xAxisForceCategorical":true,"x_axis_sort":"patient_age_at_visit","x_axis_sort_asc":true,"x_axis_sort_series":"name","x_axis_sort_series_ascending":true,"metrics":["count"],"groupby":[],"contributionMode":null,"adhoc_filters":[{"expressionType":"SIMPLE","subject":"date_started","operator":"TEMPORAL_RANGE","operatorId":"TEMPORAL_RANGE","comparator":"No
+  filter","clause":"WHERE","sqlExpression":null,"isExtra":false,"isNew":false,"datasourceWarning":false,"filterOptionName":"filter_idst49r1vfk_5skc8na4gsh"}],"order_desc":true,"row_limit":10000,"truncate_metric":true,"show_empty_columns":false,"comparison_type":"values","annotation_layers":[],"forecastPeriods":10,"forecastInterval":0.8,"x_axis_title":"Age
+  in years","x_axis_title_margin":30,"y_axis_title":"Number of pregnant women","y_axis_title_margin":50,"y_axis_title_position":"Left","sort_series_type":"sum","color_scheme":"supersetColors","seriesType":"line","opacity":0.2,"show_value":false,"only_total":true,"markerSize":6,"minorTicks":true,"zoomable":true,"show_legend":true,"legendType":"scroll","legendOrientation":"top","x_axis_time_format":"smart_date","rich_tooltip":true,"tooltipSortByMetric":true,"tooltipTimeFormat":"smart_date","y_axis_format":"SMART_NUMBER","truncateXAxis":true,"y_axis_bounds":[null,null],"extra_form_data":{},"dashboards":[6],"force":false,"result_format":"json","result_type":"full"},"result_format":"json","result_type":"full"}'
+cache_timeout: null
+uuid: 96b5f873-b200-46cd-b439-e8d69dc2f292
+version: 1.0.0
+dataset_uuid: f1553bdf-bff6-49e6-8ef2-ed70a90fae52