Antimony/SBML re-implementation of the EuroMix Generic PBK model.

This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit para…

A tool for semantics-based annotation and composition of biosimulation models

A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results

The specification documents for SBML.

An SBML to MATLAB Converter

Unit tests for models in systems biology

Git mirror of https://sourceforge.net/projects/phrasedml/

Reproducible case studies from BioModels

Tellurium Utilities

Dependencies for libroadrunner

libOmexMeta is a library aimed at providing developer-level support for reading, writing, editing and managing semantic annotations for biosimulation models.

libRoadRunner: A high-performance SBML simulator

Parameter optimization using Tellurium

Reads in an SBML file, and displays the network by generating a layout or using an existing layout. The SBML layout info can be saved to a new file.

Python Environment for Modeling and Simulating Biological Systems