Preparation for submission to PyPI as version 0.1

LICENSE

@@ -0,0 +1,22 @@
+Copyright (c) 2016, Michael Shaffer
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without modification, are permitted provided that the
+following conditions are met:
+
+1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following
+   disclaimer.
+
+2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following
+   disclaimer in the documentation and/or other materials provided with the distribution.
+
+3. Neither the name of the copyright holder nor the names of its contributors may be used to endorse or promote products
+   derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES,
+INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
+WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
+THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

SCNIC/distance_analysis.py

@@ -93,7 +93,6 @@ def bootstrap_distance_vals(table, dist_metric='braycurtis', nprocs=1, bootstrap
     """"""
     dists = paired_distances_from_table(table, dist_metric=dist_metric)
     measured_dists = dists['dist']
-    print bootstraps
 
     if nprocs == 1:
         print "Using 1 processor to calculate distances"

setup.cfg

@@ -0,0 +1,2 @@
+[metadata]
+description-file = README.md

setup.py

@@ -7,5 +7,10 @@
     version="0.1",
     install_requires=["numpy", "scipy", "networkx", "biom-format", "pandas", "fast_sparCC"],
     scripts=["scripts/SCNIC_analysis.py"],
-    packages=find_packages()
+    packages=find_packages(),
+    description="A tool for finding and summarizing modules of highly correlated observations in compositional data",
+    author="Michael Shaffer",
+    author_email='[email protected]',
+    url="https://github.com/shafferm/SCNIC/",
+    download_url="https://github.com/shafferm/SCNIC/tarball/0.1"
 )