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snakemake-file-targets: Update Workflow call
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The snakemakepath argument of Workflow was removed in Snakemake
v3.9.1 (062a2e0).
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kyleam committed Feb 23, 2017
1 parent e4a0916 commit 488e42a
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion snakemake-file-targets
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ elif len(sys.argv) == 2 and sys.argv[1] not in ["-h", "--help"]:
else:
sys.exit(__doc__)

workflow = Workflow(snakefile=snakefile, snakemakepath="snakemake")
workflow = Workflow(snakefile=snakefile)
workflow.include(snakefile)

for rule in workflow.rules:
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