GitHub - korem-lab/CopanTopologyAnalysis

Name		Name	Last commit message	Last commit date
Latest commit History 263 Commits
config		config
workflow		workflow
.gitattributes		.gitattributes
.gitignore		.gitignore
CopanTopologyAnalysis.Rproj		CopanTopologyAnalysis.Rproj
Snakefile		Snakefile
Snakefile2		Snakefile2
Snakefile_BFS		Snakefile_BFS
Snakefile_noTemp		Snakefile_noTemp
Untitled.Rmd		Untitled.Rmd
batch_blast_jobs.sh		batch_blast_jobs.sh
copan_node2vec.sh		copan_node2vec.sh
copan_node2vec_itersbatch.sh		copan_node2vec_itersbatch.sh
copan_node2vec_itersbatch_copy.sh		copan_node2vec_itersbatch_copy.sh
copan_node2vec_local.sh		copan_node2vec_local.sh
copan_node2vec_snakemake.sh		copan_node2vec_snakemake.sh
copan_node2vec_snakemake_local.sh		copan_node2vec_snakemake_local.sh
copan_validate.sh		copan_validate.sh
degree_distribution.Rmd		degree_distribution.Rmd
no_hit_query_analysis.Rmd		no_hit_query_analysis.Rmd
node_blast.sh		node_blast.sh
node_genome_mapping.Rmd		node_genome_mapping.Rmd
run_python_script.sh		run_python_script.sh
silhouette_score.sh		silhouette_score.sh
silhouette_score_analysis.Rmd		silhouette_score_analysis.Rmd
silhouette_score_batch.sh		silhouette_score_batch.sh
silhouette_score_batch_jobs.sh		silhouette_score_batch_jobs.sh
silhouette_score_parallel.sh		silhouette_score_parallel.sh
taxonomy_distribution.Rmd		taxonomy_distribution.Rmd
troubleshoot.sh		troubleshoot.sh