KFDRC Germline Workflows

KFDRC Germline Workflows Going Public

Initial work on the KFDRC Germline Workflows is now complete and freely available to the public.
These workflows have received basic testing and benchmarking on Cavatica. Other than the single sample genotyping workflow, they are not production tested and should be treated as beta software.

What's Changed

• 📚 update docs and styling by @dmiller15 in #18

Full Changelog: v0.1.0...v0.2.0

KFDRC Germline Workflows

First release for the KFDRC Germline Workflows. This release contains six preproduction workflows:

• 2 germline SNV callers (Freebayes and GATK)
• 4 germline CNV callers (CNVkit, CNVnator, and GATK gCNV Cohort & Case)

In particular this release will be used for the first iteration of the GATK SNV public app.