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Updates the requirements on StaticArrays, Distances, ProgressMeter, CUDA, CairoMakie, MPI, OhMyThreads, KernelAbstractions, Statistics, StructureFunctions, BenchmarkTools, JSON, Aqua and JET to permit the latest version.
Updates StaticArrays to 1.9.18

Release notes

Sourced from StaticArrays's releases.

v1.9.18

StaticArrays v1.9.18

Diff since v1.9.17

Merged pull requests:

Commits

Updates Distances to 0.10.12

Release notes

Sourced from Distances's releases.

v0.10.12

Distances v0.10.12

Diff since v0.10.11

Merged pull requests:

Closed issues:

  • Pairwise doesn't work with custom distance metrics (#255)
  • Custom metric gives error (#257)
  • Is distributed computing available on this package? (#263)
Commits

Updates ProgressMeter to 1.11.0

Release notes

Sourced from ProgressMeter's releases.

v1.11.0

ProgressMeter v1.11.0

Diff since v1.10.4

Merged pull requests:

Closed issues:

  • The progress bar of the nested loop will be overwritten (#349)
Commits

Updates CUDA to 6.2.1

Release notes

Sourced from CUDA's releases.

v6.2.1

CUDA v6.2.1

Diff since v6.2.0

Merged pull requests:

Closed issues:

  • rCuFFTPlan not defined (#2509)
  • Julia 1.12: Switch to Once (#2544)
  • Norm of Hermitian matrices trigger scalar indexing error (#2965)
  • LLVM 18 / Julia 1.12: Invalid vectorization leads to ptxas error (#3036)
  • LLVM 20 / Julia 1.13: Back-end crash during texture tests (#3037)
  • CUDACore - warning during precompilation (#3177)
  • Error on CUDA.rand(RGB{Float32}, ...) in CUDA.jl 6.1 and 6.2 (#3179)
  • deepcopy fails for CuArray with zero-size element type (#3181)
  • Calling findnz(A) with a COO-formatted argument causes a stack overflow (#3189)
Commits

Updates CairoMakie to 0.15.13

Commits

Updates MPI to 0.20.26

Release notes

Sourced from MPI's releases.

v0.20.26

MPI v0.20.26

Diff since v0.20.25

Merged pull requests:

Commits

Updates OhMyThreads to 0.8.6

Release notes

Sourced from OhMyThreads's releases.

v0.8.6

OhMyThreads v0.8.6

Diff since v0.8.5

Merged pull requests:

Closed issues:

  • showprogress setting (#59)
Changelog

Sourced from OhMyThreads's changelog.

Version 0.8.6

  • ![Enhancement][badge-enhancement] tmap, tmap!, tforeach, tmapreduce, treducemap, and treduce are now compatible with ProgressMeter.jl, so you can do e.g. @showprogress tmap(...)#164[gh-pr-164].

Version 0.8.5

  • ![Enhancement][badge-enhancement] SerialScheduler now accepts and ignores arguments passed to it to make switching schedulers easier #162[gh-pr-162].

Version 0.8.3

  • ![Enhancement][badge-enhancement] The overhead of tmapreduce in the serial case was reduced a bit. Sentinel values in scheduler kwarg internals were replaced by nothing #148[gh-pr-148]

Version 0.8.2

  • ![Feature][badge-feature] Added a minchunksize chunking argument for schedulers, so that they can specify a lower bound on the size of chunks which are worth parallelizing. For example, treduce(+, 1:10; minchunksize=100) will run serially, but treduce(+, 1:1000000; minchunksize=100) will be parallelized #145[gh-pr-145].
  • ![Enhancement][badge-enhancement] Operations on collections with only one 'chunk' no longer spawn an unnecessary task. That means operations like treduce(+, 1:10; minchunksize=100) will have less overhead #145[gh-pr-145].

Version 0.8.1

  • ![Feature][badge-feature] Added a @localize macro which turns @localize x y expr into let x=x, y=y; expr end (#142[gh-pr-142])
  • ![INFO][badge-info] The error messafe for captured variables now has a longer error hint that displays when the Markdown package is loaded (e.g. in the REPL.) (#142[gh-pr-142])

Version 0.8.0

  • ![BREAKING][badge-breaking] We now detect and throw errors if an OhMyThreads parallel function is passed a closure containing a Boxed variable. This behaviour can be disabled with the new @allow_boxed_captures macro, and re-enabled with @disallow_boxed_captures. (#141[gh-pr-141])
  • ![INFO][badge-info] Schedulder chunking info is no longer directly available via getproperty. This was never a public interface, but it's possible some users relied upon it #135[gh-pr-135].

Version 0.7.0

  • ![BREAKING][badge-breaking] We now use ChunkSplitters version 3.0. The function OhMyThreads.chunks has been renamed to OhMyThreads.index_chunks. The new functions index_chunks and chunks (different from the old one with the same name!) are now exported. See ChunkSplitters.jl for more information.
  • ![BREAKING][badge-breaking] If you provide a chunks or index_chunks as input we now disable the internal chunking without a warning. Previously, we did show a warning unless you had set chunking=false. In contrast, we now throw an error when you set any incompatible chunking related keyword arguments.
  • ![Deprecation][badge-deprecation] The split options :batch and :scatter are now deprecated (they still work but will be dropped at some point). Use :consecutive and :roundrobin, respectively, instead.
  • ![Enhancement][badge-enhancement] The split keyword argument can now also be a <: OhMyThreads.Split. Compared to providing a Symbol, the former can potentially give better performance. For example, you can replace :consecutive by OhMyThreads.Consecutive() and :roundrobin by OhMyThreads.RoundRobin().
  • ![Feature][badge-feature] ChannelLike is a new public (but not exported) type. ChannelLike(itr) provide a way to iterate over itr in a concurrency safe manner similar to Channel. See the docstring for more details. (#121[gh-pr-121])
  • ![Enhancement][badge-enhancement] ChannelLike is used internally for the GreedyScheduler when chunking=true. This improves performance overall but it is especially noticeable when the number of chunks is large. (#121[gh-pr-121])

Version 0.6.2

  • ![Enhancement][badge-enhancement] Added API support for enumerate(chunks(...)). Best used in combination with chunking=false

Version 0.6.1

Version 0.6.0

  • ![BREAKING][badge-breaking] Drop support for Julia < 1.10.

Version 0.5.3

  • ![Enhancement][badge-enhancement] For the special/fake "macros" like, e.g., @set, support the verbose form OhMyThreads.@set within a @tasks for-loop (#107).

... (truncated)

Commits

Updates KernelAbstractions to 0.9.42

Release notes

Sourced from KernelAbstractions's releases.

v0.9.42

KernelAbstractions v0.9.42

Diff since v0.9.41

Merged pull requests:

Closed issues:

  • [nanoOpenCL] illegal addrspace cast in Julia 1.12 (#624)
  • [pocl] Device side RNG (#641)
  • CBS vs LoopVec for POCL support (#695)
Commits
  • 49dee88 Remove per-launch heap allocation in CPU __run (#716)
  • b641c0b Update Buildkite pipeline for the new JuliaGPU cluster (release-0.9) (#717)
  • f6c1744 Remove potentially unsafe format workflow.
  • 52315e2 Bump version from 0.9.40 to 0.9.41
  • 3ae1162 Avoid relying on a RNG in the back-end. (#686)
  • 4224ad9 Bump version from 0.9.39 to 0.9.40
  • a691e2d [release-1.9] Support Julia 1.13 (#680)
  • 06aa020 Add test for kernels with multiple shared buffers (#672) (#678)
  • 8672b59 Prefix possibly unused generated variable with _ (#673)
  • 1f84b17 Bump version from 0.9.38 to 0.9.39
  • Additional commits viewable in compare view

Updates Statistics to 1.11.1

Release notes

Sourced from Statistics's releases.

v1.11.1

Statistics v1.11.1

Diff since v1.11.0

Merged pull requests:

Closed issues:

  • The quantile function can return incorrect results for integer arrays (Int8, Int16, Int32) (#119)
Commits

Updates StructureFunctions to 0.3.0

Release notes

Sourced from StructureFunctions's releases.

v0.3.0

StructureFunctions v0.3.0

Diff since v0.2.0

Breaking changes

  • Backend selection is now type-based instead of symbol-based.
    • Old: backend = :serial, :threaded, :distributed
    • New: backend = SerialBackend(), ThreadedBackend(), DistributedBackend(), GPUBackend(...), AutoBackend()
  • AutoBackend() is now the explicit auto-selection path.
  • API/docs now reflect operator-first, typed backend usage throughout.

New features

  • Added typed execution backend hierarchy:
    • SerialBackend
    • ThreadedBackend (OhMyThreads extension)
    • DistributedBackend
    • GPUBackend (KernelAbstractions extension)
    • AutoBackend
  • Added comprehensive extension-based GPU path and parity-focused backend design.
  • Added extensive new documentation pages and worked examples.

Fixes

  • Fixed critical threaded buffer indexing issue (threadid()-related safety bug).
  • Fixed OhMyThreads reduction integration/signature issues.
  • Improved type stability in backend paths (including removal of unstable dynamic Val construction in hot paths).
  • Added explicit boolean keyword annotations where needed (verbose, show_progress).
  • Fixed progress display behavior in main calculation loops.
  • Reduced JET false positives by tightening analysis scope to package code.

Documentation

  • Expanded and reorganized package documentation for v0.3.0:
    • architecture
    • backend guide
    • extensions guide
    • theory/reference material
    • real-data workflows
  • Added runnable example workflows for serial, threaded, distributed, GPU, and real-data usage.

Migration guide (quick)

  • Replace symbol backends with typed backend constructors.
  • If using threading, ensure OhMyThreads is available.
  • If using GPU backend, ensure KernelAbstractions-compatible backend dependencies are installed.

📢 API Changes:

🚀 Features

📑 Documentation

🐛 Fixes

Changelog

Sourced from StructureFunctions's changelog.

[0.3.0] - 2026-03-18

Major Features

Typed Backend System (Breaking Change)

  • Replaced symbol-based dispatch with concrete typed backends for cleaner, more type-stable execution
  • New backend types:
    • SerialBackend — Single-threaded reference implementation
    • ThreadedBackend — Multi-CPU execution via OhMyThreads.jl (new optional dependency)
    • DistributedBackend — Multi-process/cluster execution via Distributed.jl
    • GPUBackend{B} — GPU acceleration via KernelAbstractions.jl (new optional dependency)
    • AutoBackend — Automatic selection (default): distributed → threaded → serial
  • Benefit: All code paths now validated by JET; zero runtime overhead from dispatch selection

GPU Acceleration

  • Added StructureFunctionsGPUExt extension for portable GPU kernels
  • Supports NVIDIA (CUDA), AMD (ROCm), CPU (for testing) via KernelAbstractions
  • GPUBackend passes to kernels seamlessly; full parity with CPU implementations validated

Boolean Keyword Annotation

  • Added explicit ::Bool type annotations to verbose and show_progress keywords
  • Enhanced clarity; enables stricter type checking in downstream code

Progress Display Fix

  • Critical bug fix: Progress bar now displays correctly when show_progress=true
  • Previously: Progress disabled for pre-computed bins (now fixed)
  • Currently: Progress shown via ProgressMeter.@showprogress macro for all main loops

Fixed Critical threadid() PSA Bug

  • Issue: Multi-threaded execution attempted to index thread-local buffers via Threads.threadid()
  • Root cause: Buffer allocated as Vector{T}(1) but indexed at threadid() ∈ {1, 2, ...} on N threads → BoundsError
  • Solution: Removed threading from core; serial-first design delegates threading to extension
  • Impact: ThreadedBackend now completely safe; no possibility of buffer-indexing race conditions

OhMyThreads Integration

  • Added OhMyThreads.jl v0.8+ as optional weakdep
  • Fixed tmapreduce call signature (operator-first convention)
  • Replaced dynamic Val(N) construction with explicit if-elseif-Val(1/2/3) to satisfy JET type stability
  • ThreadedBackend is now fully featured and battle-tested

Breaking Changes

v0.2 v0.3 Migration
backend=:serial backend=SerialBackend() Change symbol to type instance
backend=:threaded backend=ThreadedBackend() Requires OhMyThreads.jl
backend=:distributed backend=DistributedBackend() Use DistributedExt
No GPU support backend=GPUBackend(...) New feature; use GPUExt
Implicit auto-selection backend=AutoBackend() Explicit type; now default

... (truncated)

Commits
  • 525c132 update documentation
  • 6692827 docs(Phase 6): final polish and release validation for v0.3.0
  • 3ee8f8e docs(Phase 5): comprehensive worked examples for all major workflows
  • 611d985 docs(Phase 4): comprehensive theory, architecture, and implementation guides
  • eb1b42c docs(Phase 3): comprehensive changelog for v0.3.0 + version bump
  • ab196b2 docs(Phase 2): comprehensive README overhaul for v0.3.0 release
  • cbf917a docs(Phase 1): comprehensive docstring audit and improvements for public API
  • 3f1a5c3 fix annotations on boolean kwargs, fix usage on boolean kwargs, fix erroneous...
  • d14d67b fix: unify backend execution system and resolve threadid buffer indexing bug
  • 4ab1b73 fix CI, fix test env
  • Additional commits viewable in compare view

Updates BenchmarkTools to 1.8.0

Release notes

Sourced from BenchmarkTools's releases.

v1.8.0

BenchmarkTools v1.8.0

Diff since v1.7.0

Merged pull requests:

Commits
  • 4258940 v1.8.0
  • c562362 Only GC when needed. Reduce allocs from mechanics. Add PrecompileTools worklo...
  • 78bed8d Bump JuliaRegistries/TagBot from 1.24.7 to 1.25.4 (#418)
  • 87103dc v1.7.0 (#415)
  • 0eb5fed remove buildkite CI - it was just a template! (#417)
  • 77c8009 CI: Pin GitHub Actions. add Dependabot Julia support. Add versions. Add platf...
  • 55d758c Bump codecov/codecov-action from 5 to 6 (#414)
  • f52454d docs: say AbstractDict instead of Associative (#411)
  • 88d02ff use Base.blackbox to disallow LLVM from simplifying the bench loop (#413)
  • 0f4cf5b Merge pull request #410 from JuliaCI/dependabot/github_actions/actions/cache-5
  • Additional commits viewable in compare view

Updates JSON to 1.6.1

Release notes

Sourced from JSON's releases.

v1.6.1

JSON v1.6.1

Diff since v1.6.0

Merged pull requests:

Closed issues:

  • Multiple Styles for same Struct not working (#434)
  • JSON ignores StructUtils methods for custom JSONStyle for structlike (#462)
Commits

Updates Aqua to 0.8.16

Release notes

Sourced from Aqua's releases.

v0.8.16

The changes are documented in the CHANGELOG.md file.

Diff since v0.8.15

Changelog

Sourced from Aqua's changelog.

Version [v0.8.16] - 2026-06-05

Changed

  • Adapt to deprecations in julia 1.14. (#381)
  • Fix some world age issues in test_ambiguities. (#366)

Version [v0.8.15] - 2026-06-02

Changed

  • Use Base.isType for Type{...} checks in piracy detection so it keeps working when Type{Foo} is no longer a DataType on future Julia versions. (#379)

Version [v0.8.14] - 2025-08-04

Changed

  • Adapt to internal method table changes in Julia 1.12 and later. (#344)

Version [v0.8.13] - 2025-05-28

Changed

  • Adapt to internal method table changes in Julia 1.12 and later. (#334)

Version [v0.8.12] - 2025-05-05

Changed

  • Add test_undocumented_names to verify that all public symbols have docstrings (not including the module itself). This test is not enabled by default in test_all. (#313)

Version [v0.8.11] - 2025-02-06

Changed

  • Avoid deprecation warnings concerning Base.isbindingresolved with julia nightly. (#322)

Version [v0.8.10] - 2025-01-26

Changed

  • No longer call @testset for testsets that are skipped. (#319)

Version [v0.8.9] - 2024-10-15

Changed

... (truncated)

Commits
  • 37326ae Update changelog
  • 5c0da47 Bump version to v0.8.16
  • 429466e Fix for old julias
  • 7370f3f Adapt to various deprecations around Type{T} in julia nightly (#381)
  • e1cd164 Bump julia-actions/setup-julia from 2 to 3 (#373)
  • a5c4799 Fix Aqua.test_persistent_tasks() example (#371)
  • 7bb6287 Bump codecov/codecov-action from 5 to 6 (#372)
  • bd4a94e Bump julia-actions/cache from 2 to 3 (#370)
  • 552e170 Fix a MethodError when ambiguities are detected (#366)
  • 25c72ad use more precise structural inspection of types for ambiguity exclusions (#327)
  • Additional commits viewable in compare view

Updates JET to 0.11.6

Release notes

Sourced from JET's releases.

v0.11.6

JET v0.11.6

Diff since v0.11.5

Merged pull requests:

  • toplevel: Align virtual process worlds with JuliaInterpreter v0.11 (#833) (@​aviatesk)
  • typeinfer: Drop redundant eager add of cached callee reports (#835) (@​aviatesk)
  • abstractinterpret: Preserve reports from distinct callsites (#837) (@​aviatesk)
Commits
  • a6c6265 version 0.11.6
  • 230ab8e toplevel: Align virtual process worlds with JuliaInterpreter (#833)
  • 9bc9057 toplevel: Support versioned module expressions
  • 23d7d7c abstractinterpret: Preserve reports from distinct callsites (#837)
  • c9f3e41 typeinfer: Drop redundant eager add of cached callee reports (#835)
  • 87e4120 update LICENSE
  • b230932 update CHANGELOG
  • 5d7cf81 analyzer: Respect inference world for globals
  • b085eb6 version 0.11.5
  • 4077279 deps: Update to LoweredCodeUtils v3.6.2 (#832)
  • Additional commits viewable in compare view

@dependabot dependabot Bot added dependencies Pull requests that update a dependency file julia Pull requests that update julia code labels Jul 15, 2026
@dependabot
Bump the all-julia-packages group across 1 directory with 14 updates
a9f5d6d 
Updates the requirements on [StaticArrays](https://github.com/JuliaArrays/StaticArrays.jl), [Distances](https://github.com/JuliaStats/Distances.jl), [ProgressMeter](https://github.com/timholy/ProgressMeter.jl), [CUDA](https://github.com/JuliaGPU/CUDA.jl), [CairoMakie](https://github.com/MakieOrg/Makie.jl), [MPI](https://github.com/JuliaParallel/MPI.jl), [OhMyThreads](https://github.com/JuliaFolds2/OhMyThreads.jl), [KernelAbstractions](https://github.com/JuliaGPU/KernelAbstractions.jl), [Statistics](https://github.com/JuliaStats/Statistics.jl), [StructureFunctions](https://github.com/jbphyswx/StructureFunctions.jl), [BenchmarkTools](https://github.com/JuliaCI/BenchmarkTools.jl), [JSON](https://github.com/JuliaIO/JSON.jl), [Aqua](https://github.com/JuliaTesting/Aqua.jl) and [JET](https://github.com/aviatesk/JET.jl) to permit the latest version.

Updates `StaticArrays` to 1.9.18
- [Release notes](https://github.com/JuliaArrays/StaticArrays.jl/releases)
- [Commits](JuliaArrays/StaticArrays.jl@v1.9.0...v1.9.18)

Updates `Distances` to 0.10.12
- [Release notes](https://github.com/JuliaStats/Distances.jl/releases)
- [Commits](JuliaStats/Distances.jl@v0.10.0...v0.10.12)

Updates `ProgressMeter` to 1.11.0
- [Release notes](https://github.com/timholy/ProgressMeter.jl/releases)
- [Commits](timholy/ProgressMeter.jl@v1.9.0...v1.11.0)

Updates `CUDA` to 6.2.1
- [Release notes](https://github.com/JuliaGPU/CUDA.jl/releases)
- [Commits](https://github.com/JuliaGPU/CUDA.jl/commits/v6.2.1)

Updates `CairoMakie` to 0.15.13
- [Release notes](https://github.com/MakieOrg/Makie.jl/releases)
- [Changelog](https://github.com/MakieOrg/Makie.jl/blob/master/CHANGELOG.md)
- [Commits](https://github.com/MakieOrg/Makie.jl/commits)

Updates `MPI` to 0.20.26
- [Release notes](https://github.com/JuliaParallel/MPI.jl/releases)
- [Commits](JuliaParallel/MPI.jl@v0.20.0...v0.20.26)

Updates `OhMyThreads` to 0.8.6
- [Release notes](https://github.com/JuliaFolds2/OhMyThreads.jl/releases)
- [Changelog](https://github.com/JuliaFolds2/OhMyThreads.jl/blob/master/CHANGELOG.md)
- [Commits](JuliaFolds2/OhMyThreads.jl@v0.8.0...v0.8.6)

Updates `KernelAbstractions` to 0.9.42
- [Release notes](https://github.com/JuliaGPU/KernelAbstractions.jl/releases)
- [Commits](JuliaGPU/KernelAbstractions.jl@v0.9.0...v0.9.42)

Updates `Statistics` to 1.11.1
- [Release notes](https://github.com/JuliaStats/Statistics.jl/releases)
- [Commits](JuliaStats/Statistics.jl@v1.4.0...v1.11.1)

Updates `StructureFunctions` to 0.3.0
- [Release notes](https://github.com/jbphyswx/StructureFunctions.jl/releases)
- [Changelog](https://github.com/jbphyswx/StructureFunctions.jl/blob/main/CHANGELOG.md)
- [Commits](0.1.0...v0.3.0)

Updates `BenchmarkTools` to 1.8.0
- [Release notes](https://github.com/JuliaCI/BenchmarkTools.jl/releases)
- [Commits](JuliaCI/BenchmarkTools.jl@v0.0.1...v1.8.0)

Updates `JSON` to 1.6.1
- [Release notes](https://github.com/JuliaIO/JSON.jl/releases)
- [Commits](JuliaIO/JSON.jl@v0.2.4...v1.6.1)

Updates `Aqua` to 0.8.16
- [Release notes](https://github.com/JuliaTesting/Aqua.jl/releases)
- [Changelog](https://github.com/JuliaTesting/Aqua.jl/blob/master/CHANGELOG.md)
- [Commits](JuliaTesting/Aqua.jl@v0.1.0...v0.8.16)

Updates `JET` to 0.11.6
- [Release notes](https://github.com/aviatesk/JET.jl/releases)
- [Changelog](https://github.com/aviatesk/JET.jl/blob/master/CHANGELOG.md)
- [Commits](aviatesk/JET.jl@v0.0.1...v0.11.6)

---
updated-dependencies:
- dependency-name: Aqua
  dependency-version: 0.8.16
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: BenchmarkTools
  dependency-version: 1.8.0
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: CairoMakie
  dependency-version: 0.15.13
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: CUDA
  dependency-version: 6.2.1
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: Distances
  dependency-version: 0.10.12
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: JET
  dependency-version: 0.11.5
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: JSON
  dependency-version: 1.6.1
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: KernelAbstractions
  dependency-version: 0.9.42
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: MPI
  dependency-version: 0.20.26
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: OhMyThreads
  dependency-version: 0.8.6
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: ProgressMeter
  dependency-version: 1.11.0
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: StaticArrays
  dependency-version: 1.9.18
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: Statistics
  dependency-version: 1.11.1
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: StructureFunctions
  dependency-version: 0.3.0
  dependency-type: direct:production
  dependency-group: all-julia-packages
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot
dependabot Bot force-pushed the dependabot/julia/all-julia-packages-e78359dda0 branch from 214afff to a9f5d6d Compare July 22, 2026 15:28
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