v1.1

README.ipynb

@@ -4,6 +4,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
+    "# microfiltR\n",
     "# Processing and filtering marker gene datasets\n",
     "\n",
     "Here, we'll walk through some filtering strategies applicable to compositional marker gene studies. We will employ several custom R functions designed to manipulate phyloseq-class datasets that aid in the processing, filtering, and reproducability of marker gene studies. We apply this workflow to a moderately sized 16S community dataset generated on an Illumina HiSeq, though these strategies should be widely useful to any marker gene and easily scalable to large datasets with thousands of taxa and samples. _For reference, this entire notebook can be run in about 30 seconds on a 13\" 2013 Macbook Pro._<br>\n",