test_record_files_operations assert 2 == 1 + where 2 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f4e4d03e4c0>.count + where <flask_sqlalchemy.query.Query object at 0x7f4e4d03e4c0> = Bucket.query

test_record_files_clear AssertionError: assert 4 == 3 + where 4 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f4e4d021070>.count + where <flask_sqlalchemy.query.Query object at 0x7f4e4d021070> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_teardown_full AssertionError: assert 7 == 3 + where 7 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f4e5523b400>.count + where <flask_sqlalchemy.query.Query object at 0x7f4e5523b400> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_teardown_partial AssertionError: assert 10 == 3 + where 10 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f4e4b15f760>.count + where <flask_sqlalchemy.query.Query object at 0x7f4e4b15f760> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_soft_delete AssertionError: assert 13 == 3 + where 13 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f4e4c94d0a0>.count + where <flask_sqlalchemy.query.Query object at 0x7f4e4c94d0a0> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_copy assert 10 == 1 + where 10 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f4e4b489640>.count + where <flask_sqlalchemy.query.Query object at 0x7f4e4b489640> = ObjectVersion.query

Black format check --- /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/conftest.py 2025-03-09 12:43:08.514964+00:00 +++ /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/conftest.py 2025-03-09 12:44:39.902799+00:00 @@ -39,10 +39,11 @@ app_config["S3_ACCESS_KEY_ID"] = os.environ["S3_ACCESS_KEY_ID"] app_config["S3_SECRET_ACCESS_KEY"] = os.environ["S3_SECRET_ACCESS_KEY"] return app_config + @pytest.fixture() def s3_location(app, db): """Creates an s3 location for a test.""" from invenio_files_rest.models import Location

pydocstyle-check /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/conftest.py:1 at module level: D100: Missing docstring in public module

Black format check --- /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/test_service_s3_backend.py 2025-03-09 12:43:08.514964+00:00 +++ /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/test_service_s3_backend.py 2025-03-09 12:44:40.279086+00:00 @@ -10,11 +10,11 @@ file_service, s3_location, example_s3_file_record, identity_simple, ): - + recid = example_s3_file_record["id"] key = "dataset.bin" total_size = 17 * 1024 * 1024 # 17MB part_size = 10 * 1024 * 1024 # 10MB @@ -90,6 +90,6 @@ result = file_service.get_file_content(identity_simple, recid, key) assert result.file_id == key # get the content from S3 and make sure it matches the original content sent_file = result.send_file() - assert content == requests.get(sent_file.headers['Location']).content + assert content == requests.get(sent_file.headers["Location"]).content

Black format check --- /home/runner/work/invenio-records-resources/invenio-records-resources/invenio_records_resources/services/files/tasks.py 2025-03-09 12:43:08.504964+00:00 +++ /home/runner/work/invenio-records-resources/invenio-records-resources/invenio_records_resources/services/files/tasks.py 2025-03-09 12:45:36.495832+00:00 @@ -90,11 +90,13 @@ if not checksum.startswith("multipart:"): return # multipart checksum looks like: multipart:<s3 multipart checksum>-part_size # s3 multipart checksum is the etag of the multipart object and looks like # hex(md5(<md5(part1) + md5(part2) + ...>))-<number of parts> - original_checksum_hex, _number_of_parts_str, part_size_str = checksum[10:].rsplit("-") + original_checksum_hex, _number_of_parts_str, part_size_str = checksum[ + 10: + ].rsplit("-") part_size = int(part_size_str) storage = current_files_rest.storage_factory(fileinstance=file_instance) with storage.open("rb") as f: object_checksum = hashlib.md5()

test_record_files_operations assert 2 == 1 + where 2 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f8d05c65c70>.count + where <flask_sqlalchemy.query.Query object at 0x7f8d05c65c70> = Bucket.query

test_record_files_clear AssertionError: assert 4 == 3 + where 4 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f8d05c278c0>.count + where <flask_sqlalchemy.query.Query object at 0x7f8d05c278c0> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_teardown_full AssertionError: assert 7 == 3 + where 7 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f8d05c718e0>.count + where <flask_sqlalchemy.query.Query object at 0x7f8d05c718e0> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_teardown_partial AssertionError: assert 10 == 3 + where 10 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f8d05c73530>.count + where <flask_sqlalchemy.query.Query object at 0x7f8d05c73530> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_soft_delete AssertionError: assert 13 == 3 + where 13 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f8d05027800>.count + where <flask_sqlalchemy.query.Query object at 0x7f8d05027800> = <class 'mock_module.models.FileRecordMetadata'>.query + where <class 'mock_module.models.FileRecordMetadata'> = models.FileRecordMetadata

test_record_files_copy assert 10 == 1 + where 10 = count() + where count = <flask_sqlalchemy.query.Query object at 0x7f8d05c27350>.count + where <flask_sqlalchemy.query.Query object at 0x7f8d05c27350> = ObjectVersion.query

Black format check --- /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/conftest.py 2025-03-09 12:43:08.162519+00:00 +++ /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/conftest.py 2025-03-09 12:45:04.657264+00:00 @@ -39,10 +39,11 @@ app_config["S3_ACCESS_KEY_ID"] = os.environ["S3_ACCESS_KEY_ID"] app_config["S3_SECRET_ACCESS_KEY"] = os.environ["S3_SECRET_ACCESS_KEY"] return app_config + @pytest.fixture() def s3_location(app, db): """Creates an s3 location for a test.""" from invenio_files_rest.models import Location

pydocstyle-check /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/conftest.py:1 at module level: D100: Missing docstring in public module

Black format check --- /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/test_service_s3_backend.py 2025-03-09 12:43:08.162519+00:00 +++ /home/runner/work/invenio-records-resources/invenio-records-resources/tests/services/files/s3/test_service_s3_backend.py 2025-03-09 12:45:05.217098+00:00 @@ -10,11 +10,11 @@ file_service, s3_location, example_s3_file_record, identity_simple, ): - + recid = example_s3_file_record["id"] key = "dataset.bin" total_size = 17 * 1024 * 1024 # 17MB part_size = 10 * 1024 * 1024 # 10MB @@ -90,6 +90,6 @@ result = file_service.get_file_content(identity_simple, recid, key) assert result.file_id == key # get the content from S3 and make sure it matches the original content sent_file = result.send_file() - assert content == requests.get(sent_file.headers['Location']).content + assert content == requests.get(sent_file.headers["Location"]).content

Black format check --- /home/runner/work/invenio-records-resources/invenio-records-resources/invenio_records_resources/services/files/tasks.py 2025-03-09 12:43:08.152519+00:00 +++ /home/runner/work/invenio-records-resources/invenio-records-resources/invenio_records_resources/services/files/tasks.py 2025-03-09 12:46:23.053853+00:00 @@ -90,11 +90,13 @@ if not checksum.startswith("multipart:"): return # multipart checksum looks like: multipart:<s3 multipart checksum>-part_size # s3 multipart checksum is the etag of the multipart object and looks like # hex(md5(<md5(part1) + md5(part2) + ...>))-<number of parts> - original_checksum_hex, _number_of_parts_str, part_size_str = checksum[10:].rsplit("-") + original_checksum_hex, _number_of_parts_str, part_size_str = checksum[ + 10: + ].rsplit("-") part_size = int(part_size_str) storage = current_files_rest.storage_factory(fileinstance=file_instance) with storage.open("rb") as f: object_checksum = hashlib.md5()

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

jsonschema.exceptions.RefResolutionError is deprecated as of version 4.18.0. If you wish to catch potential reference resolution errors, directly catch referencing.exceptions.Unresolvable.

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

jsonschema.exceptions.RefResolutionError is deprecated as of version 4.18.0. If you wish to catch potential reference resolution errors, directly catch referencing.exceptions.Unresolvable.

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

The '__version_info__' attribute is deprecated and will be removed in in a future version. Use feature detection or 'packaging.Version(importlib.metadata.version("marshmallow")).release' instead.

The '__version_info__' attribute is deprecated and will be removed in in a future version. Use feature detection or 'packaging.Version(importlib.metadata.version("marshmallow")).release' instead.

The 'default' argument to fields is deprecated. Use 'dump_default' instead.

The 'missing' argument to fields is deprecated. Use 'load_default' instead.

'crypt' is deprecated and slated for removal in Python 3.13

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

jsonschema.exceptions.RefResolutionError is deprecated as of version 4.18.0. If you wish to catch potential reference resolution errors, directly catch referencing.exceptions.Unresolvable.

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

jsonschema.exceptions.RefResolutionError is deprecated as of version 4.18.0. If you wish to catch potential reference resolution errors, directly catch referencing.exceptions.Unresolvable.

jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.

Deprecated call to `pkg_resources.declare_namespace('fs')`. Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages

Deprecated call to `pkg_resources.declare_namespace('fs.opener')`. Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages