Skip to content
@hbctraining

Teaching materials at the Harvard Chan Bioinformatics Core

Pinned Loading

  1. Intro-to-R-flipped Intro-to-R-flipped Public

    R 78 41

  2. Shell-for-bioinformatics Shell-for-bioinformatics Public

    HTML 39 24

  3. scRNA-seq_online scRNA-seq_online Public

    R 556 188

  4. Intro-to-rnaseq-hpc-salmon-flipped Intro-to-rnaseq-hpc-salmon-flipped Public

    Introduction to bulk RNA-seq

    HTML 102 42

  5. Intro-to-DGE Intro-to-DGE Public

    HTML 188 82

  6. Investigating-chromatin-biology-ChIPseq Investigating-chromatin-biology-ChIPseq Public

    HTML 85 37

Repositories

Showing 10 of 55 repositories
  • main Public template
    hbctraining/main’s past year of commit activity
    SCSS 52 17 0 1 Updated Feb 7, 2025
  • Intro-to-rnaseq-hpc-salmon-flipped Public

    Introduction to bulk RNA-seq

    hbctraining/Intro-to-rnaseq-hpc-salmon-flipped’s past year of commit activity
    HTML 102 42 5 1 Updated Feb 7, 2025
  • Training-modules Public

    Materials for short, half-day workshops

    hbctraining/Training-modules’s past year of commit activity
    Jupyter Notebook 320 149 18 2 Updated Feb 5, 2025
  • Intro-to-shell-fasrc-flipped Public archive

    Shell training materials for the FAS-RC cluster

    hbctraining/Intro-to-shell-fasrc-flipped’s past year of commit activity
    Shell 5 4 1 0 Updated Feb 4, 2025
  • Intro-to-peak-analysis Public

    An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq

    hbctraining/Intro-to-peak-analysis’s past year of commit activity
    Shell 21 CC0-1.0 4 8 0 Updated Feb 4, 2025
  • Intro-to-R-flipped Public
    hbctraining/Intro-to-R-flipped’s past year of commit activity
    R 78 41 3 0 Updated Feb 4, 2025
  • Shell-for-bioinformatics Public
    hbctraining/Shell-for-bioinformatics’s past year of commit activity
    HTML 39 24 6 0 Updated Feb 4, 2025
  • Investigating-chromatin-biology-ChIPseq Public
    hbctraining/Investigating-chromatin-biology-ChIPseq’s past year of commit activity
    HTML 85 CC0-1.0 37 8 0 Updated Feb 4, 2025
  • Pseudobulk-for-scRNAseq Public

    Approaches for looking at differential expression and differential abundance in scRNA-seq

    hbctraining/Pseudobulk-for-scRNAseq’s past year of commit activity
    R 0 CC0-1.0 1 8 0 Updated Feb 4, 2025
  • Intro-to-variant-analysis Public
    hbctraining/Intro-to-variant-analysis’s past year of commit activity
    HTML 30 10 7 0 Updated Feb 4, 2025
View all repositories