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adding enviroment variable TMPVAR for NCBI FCS GX #398

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adding enviroment variable TMPVAR for NCBI FCS GX #398

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4 changes: 4 additions & 0 deletions env/common/templates/galaxy/config/tpv/tools.yaml.j2
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Original file line number Diff line number Diff line change
Expand Up @@ -1274,11 +1274,15 @@ tools:
# local test tools

toolshed.g2.bx.psu.edu/repos/iuc/ncbi_fcs_gx/ncbi_fcs_gx/.*:
env:
- name: TMPDIR
value: /dev/shm
scheduling:
require:
- resize-shm
- jetstream2
- pulsar

ncbi_fcs_gx:
inherits: toolshed.g2.bx.psu.edu/repos/iuc/ncbi_fcs_gx/ncbi_fcs_gx/.*

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3 changes: 3 additions & 0 deletions env/common/templates/galaxy/config/tpv/tools_vgp.yaml.j2
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Expand Up @@ -518,6 +518,9 @@ tools:
- pulsar

toolshed.g2.bx.psu.edu/repos/iuc/ncbi_fcs_gx/ncbi_fcs_gx/.*:
env:
- name: TMPDIR
value: /dev/shm
scheduling:
require:
- resize-shm
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